DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and TLX1

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_011538046.1 Gene:TLX1 / 3195 HGNCID:5056 Length:342 Species:Homo sapiens


Alignment Length:402 Identity:99/402 - (24%)
Similarity:139/402 - (34%) Gaps:136/402 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 HHISKLAAAAVASHGHAHQQLLLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASAS 230
            ||:..         |||.      |.|.|..|..:     ||...|.......|.|...|.....
Human     7 HHLHP---------GHAE------PISFGIDQILN-----SPDQGGCMGPASRLQDGEYGLGCLV 51

  Fly   231 ASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDT 295
            ..|.......:|||..|..|.:           |.:..|...||.:|..|       :||  ...
Human    52 GGAYTYGGGGSAAATGAGGAGA-----------YGTGGPGGPGGPAGGGG-------ACS--MGP 96

  Fly   296 VMNSYQ-SMSV-----PASASAQFAQFYQHATAAASAVSAASAGAIGVDS---LGNACTQP---A 348
            :..||. :|::     |.....        ::..|.|:||  ||.|.|.:   |..|...|   |
Human    97 LTGSYNVNMALAGGPGPGGGGG--------SSGGAGALSA--AGVIRVPAHRPLAGAVAHPQPLA 151

  Fly   349 SGV--------MPGAGGAGGAGIADLPRYPWM------------------TLTDWMGSPFERVVC 387
            :|:        |||.....|.      .:|||                  |:|..:|.|::    
Human   152 TGLPTVPSVPAMPGVNNLTGL------TFPWMESNRRYTKDRFTVALSPFTVTRRIGHPYQ---- 206

  Fly   388 GDFNGPNGCP--RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRR 450
                  |..|  :::.|.::||.|..||||.||...||....|..:|.||.:|:.|:|.||||||
Human   207 ------NRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRR 265

  Fly   451 MKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQQQHQQQQQ 515
            .|.:             |:..||:|                 .::||..:...|.||:..|:...
Human   266 TKWR-------------RQTAEERE-----------------AERQQANRILLQLQQEAFQKSLA 300

  Fly   516 QPQDHHSIIAHN 527
            ||.....:..||
Human   301 QPLPADPLCVHN 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 26/51 (51%)
Abdominal-A 456..478 CDD:289192 4/21 (19%)
TLX1XP_011538046.1 Homeobox 216..269 CDD:278475 26/52 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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