Protein Alignment abd-A and vnd

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Alignment Length: 491
• Identity: 125/491 - (25%)
• Similarity: 194/491 - (39%)
• Gaps: 115/491 - (23%)

  Fly     5 VFDSMLPKYPQFQPFISSHHLT-TTPPNSSSAAVAAALAAAAASASASVSASSSSNNNSSNTIAG 68
            :||:.:|...:     |..|:: ......|....|||.|||||...:.:|..|:|.:.|.:...|
  Fly   187 LFDAKVPSSQR-----SGFHISDILNLEGSELKNAAAAAAAAAHHGSDLSHHSASESTSGHRGQG 246

  Fly    69 SNTSNTNNSSSSPSSSSNNNSNLNLSGGSLSPSHLSQHLGQSPHSPVSSSSPFQQHHPQVQQQHL 133
            |:||.:..|.:....|::.:.|.:.:||.         .|::.|     .|..:.|.|.
  Fly   247 SHTSPSALSPTPAGVSADEHHNGSGTGGG---------AGEADH-----HSTTEHHAPP------ 291

  Fly   134 NHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASH------GHAHQQLLLTPPS 192
            :|.||||.||  |||||.:       .|..||||...:|...:|.|      .|||..     .:
  Fly   292 SHPQQQHPHH--QQHHHPH-------LLLPQQHHQQAVAPLPLAHHQSGEAQSHAHAN-----AA 342

  Fly   193 AGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASA--SAASSVAAAAAAAA-------- 247
            |.:..|..::.:.:..|:|  ....:|..|.|||.....|:  ..|.::...:..:|
  Fly   343 AAHLLASHNAAAAAAVAAG--QYLPNLPKNFPGSFGDEMSSYHHMAQTMLQHSGRSAWIKENELY 405

  Fly   248 -----AAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTD-----------TV 296
                 |:..|:..:.:...|.|:.::..:...|||       :.||.||..|           |:
  Fly   406 GTQQPASPDSTSPVTSEVSYTYIGSNCQTSPALSG-------DYKSYSRSADSDALSVGDALHTL 463

  Fly   297 MNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGV-----DSLGNACTQPASGVMPGAG 356
            ..|..:.|...:.:|.......:.|...:..|..:.|..|.     |||.....:.....:..|.
  Fly   464 HGSSGNGSAGGAPTAHALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDAD 528

  Fly   357 GAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCP--RRRGRQTYTRFQTLELEKEFHF 419
            |:||                           ||.||.:|.|  :|:.|..:|:.||.|||:.|..
  Fly   529 GSGG---------------------------GDANGSDGLPNKKRKRRVLFTKAQTYELERRFRQ 566

  Fly   420 NHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 455
            ..||:...|..:|..:.||..|:||||||.|.|.|:
  Fly   567 QRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKR 602

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	23/51 (45%)
		Abdominal-A	456..478	CDD:289192	125/491 (25%)
vnd	NP_476786.2	Homeobox	548..601	CDD:278475	23/52 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.910