Protein Alignment abd-A and Nkx2-3

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_001101064.1
• Gene: Nkx2-3 / 309389
• RGDID: 1308521
• Length: 362
• Species: Rattus norvegicus
• Alignment Length: 349
• Identity: 73/349 - (20%)
• Similarity: 105/349 - (30%)
• Gaps: 155/349 - (44%)

  Fly   113 SPVSSSSPFQQHHPQVQQQHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVA 177
            ||| :|:||.      .:..||.:||:|.|             .|.||.:.:||
  Rat     5 SPV-TSTPFS------VKDILNLEQQRHFH-------------GAHLQAELEQH----------- 38

  Fly   178 SHGHAHQQLLLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAA 242
                                                 ||                 ||...:|||
  Rat    39 -------------------------------------LH-----------------SAPCMLAAA 49

  Fly   243 AAAAAAAASSSFAIPTSKMYPYVSNHPSSHG-GLSGMAG----FTGLEDKSCSRYTDTVMNSYQS 302
            .....:.|.........:...|:::..::.| |:||:..    .|.|.| |||...:      |.
  Rat    50 EGTQFSDAGEEDEEEEGEKLSYLNSLAAAEGHGVSGLCPQSYVHTVLRD-SCSGPKE------QE 107

  Fly   303 MSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLP 367
            ..|.:..|.:..|..:...||..                  |.....|..|            .|
  Rat   108 EEVVSERSQKSCQLKKSLEAAGD------------------CKASEDGERP------------KP 142

  Fly   368 RYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 432
            |                            .||:.|..:::.|..|||:.|....||:...|..:|
  Rat   143 R----------------------------SRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLA 179

  Fly   433 HALCLTERQIKIWFQNRRMKLKKE 456
            .:|.||..|:||||||||.|.|::
  Rat   180 SSLKLTSTQVKIWFQNRRYKCKRQ 203

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	23/51 (45%)
		Abdominal-A	456..478	CDD:289192	0/1 (0%)
Nkx2-3	NP_001101064.1	Homeobox	148..202	CDD:395001	23/53 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910