DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and HHEX

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_002720.1 Gene:HHEX / 3087 HGNCID:4901 Length:270 Species:Homo sapiens


Alignment Length:315 Identity:72/315 - (22%)
Similarity:111/315 - (35%) Gaps:105/315 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 AAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPA--- 307
            ||.|.......||..:.|   .||:..                   |.:.::....:...||   
Human     9 AAGAVGVPLYAPTPLLQP---AHPTPF-------------------YIEDILGRGPAAPTPAPTL 51

  Fly   308 -SASAQFAQF-----------------YQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPG 354
             |.::.|...                 :.|.:|||.|.:.                        |
Human    52 PSPNSSFTSLVSPYRTPVYEPTPIHPAFSHHSAAALAAAY------------------------G 92

  Fly   355 AGGAGGAGIADLPRYPW-MTLTDWMGSPFERVVCGDFNGPNGCP-------------RRRGRQTY 405
            .||.||      |.||: .|:.|:..:...       :.|.|.|             |:.|:..:
Human    93 PGGFGG------PLYPFPRTVNDYTHALLR-------HDPLGKPLLWSPFLQRPLHKRKGGQVRF 144

  Fly   406 TRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRD 470
            :..||:||||:|....||:...|..:|..|.|:|||:|.||||||.|    .|.:|:.|.|:.: 
Human   145 SNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAK----WRRLKQENPQSNK- 204

  Fly   471 REEQEKMKA---QETMKSAQQNKQVQQQQQQ---QQQQQQQQQQQHQQQQQQPQD 519
            :||.|.:.:   |.....::|||.......|   ....|:..:.:..:...|..|
Human   205 KEELESLDSSCDQRQDLPSEQNKGASLDSSQCSPSPASQEDLESEISEDSDQEVD 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 24/51 (47%)
Abdominal-A 456..478 CDD:289192 7/21 (33%)
HHEXNP_002720.1 Interaction with SOX13. /evidence=ECO:0000269|PubMed:20028982 1..137 31/186 (17%)
Required for WNT signaling induction. /evidence=ECO:0000269|PubMed:20028982 137..270 41/128 (32%)
Homeobox 142..194 CDD:395001 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..270 14/67 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.