Protein Alignment abd-A and Zfhx3

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: XP_038954238.1
• Gene: Zfhx3 / 307829
• RGDID: 1560268
• Length: 3730
• Species: Rattus norvegicus
• Alignment Length: 608
• Identity: 109/608 - (17%)
• Similarity: 166/608 - (27%)
• Gaps: 301/608 - (49%)

  Fly    62 SSNTIAGSNTSNTNNSSSSP-----------------SSSSNNNSNLNLSGGSLSPSHLSQHLGQ 109
            :|.::.|...|||..:|..|                 |...|..|:.:||    ||:.....:..
  Rat  3141 NSPSLPGFTPSNTALTSPKPNLMGLPSTTVPSPGLPTSGLPNKPSSASLS----SPTPAQATMAM 3201

  Fly   110 SPHSPVSSSSPFQQHHPQVQQQHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAA 174
            :|..|...    ||..||||.......||  :...|.....|..........::::.|..|
  Rat  3202 APQQPPQP----QQPQPQVQPPPPPAAQQ--IPTPQLPLPQQRKDKDGEKGKEKEKAHKGK---- 3256

  Fly   175 AVASHGHAHQQLLLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAAS-- 237
                 |.        ||.....:.|:                      :|.:|:|:.||...:
  Rat  3257 -----GE--------PPPVPKKEKGE----------------------APTAATATISAPLPAME 3286

  Fly   238 ---SVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNS 299
               ..|...|..||..|...|:.||:..||.            :.||                :.
  Rat  3287 YTVDPAQLQALQAALTSDPTALLTSQFLPYF------------VPGF----------------SP 3323

  Fly   300 YQSMSVPASASAQFAQ-FYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGI 363
            |.:..:|.:..:.:.| .|               |..|:.....|.:|...|:.||:
  Rat  3324 YYAPQIPGALQSGYLQPMY---------------GMEGLFPYSPALSQALMGLSPGS-------- 3365

  Fly   364 ADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRR 428
                                                 ..|.|.::|
  Rat  3366 -------------------------------------LLQQYQQYQ------------------- 3374

  Fly   429 IEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQ 493
                                         ::::|..:|.::.:::|::          ||.:|:|
  Rat  3375 -----------------------------QSLQEAIQQQQQQQQQQQQ----------QQQRQLQ 3400

  Fly   494 QQQQQQQQ-QQQQQQQQHQQQQQQPQDHHSIIAHNP----------------------------- 528
            |||||||: ||||||||.|||||||:...:.:...|
  Rat  3401 QQQQQQQKVQQQQQQQQQQQQQQQPKASQTPVPQGPASPDKDPAKESPKPEEQKNVPREVSPLLP 3465

  Fly   529 -----------------------------------------------GHLH------HSVVGQND 540
                                                           .||.      .|||...:
  Rat  3466 KPPEEPEAESKSASADSLCDPFIVPKVQYKLVCRKCQAGFGDEEAARSHLKSLCFFGQSVVNLQE 3530

  Fly   541 LKLGLGMGVGVGVGGIGPGIGGG 563
            :.|.:..|.|.|.||.|.|.|||
  Rat  3531 MVLHVPTGSGGGGGGGGSGGGGG 3553

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	3/51 (6%)
		Abdominal-A	456..478	CDD:289192	3/21 (14%)
Zfhx3	XP_038954238.1	C2H2 Zn finger	672..692	CDD:275368
		C2H2 Zn finger	727..744	CDD:275368
		C2H2 Zn finger	1374..1394	CDD:275368
		C2H2 Zn finger	1412..1432	CDD:275371
		C2H2 Zn finger	1440..1461	CDD:275371
		C2H2 Zn finger	1556..1580	CDD:275368
		C2H2 Zn finger	1607..1625	CDD:275368
		HOX	2156..2212	CDD:197696
		Homeobox	2256..2310	CDD:395001
		COG5576	2604..2750	CDD:227863
		Homeobox	2657..2710	CDD:395001
		Homeobox	2961..3014	CDD:395001

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910