DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and dlx4a

DIOPT Version :10

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_571375.1 Gene:dlx4a / 30561 ZFINID:ZDB-GENE-980526-73 Length:250 Species:Danio rerio


Alignment Length:278 Identity:61/278 - (21%)
Similarity:95/278 - (34%) Gaps:102/278 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 LTPPSAGNS-QAGDSSCSPSPSA-SGSSSLHRSLNDNSPGSASA-----SASASAASSVAAAAAA 245
            :|..|...| :|.|    ||.|| ...|..::|...:|||.:.|     .....|.|...||.:.
Zfish     1 MTMTSLSESLEASD----PSKSAFLEFSHGYQSHQQHSPGVSHAHYPVHGLHQGAHSQYDAAFSP 61

  Fly   246 AAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASAS 310
            .||    |::.|.:..|....:||.::                                :|    
Zfish    62 GAA----SYSRPLAYHYSTAHHHPGAY--------------------------------LP---- 86

  Fly   311 AQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLT 375
                  |||.:            |:|...:.:|.::..|.:..|.....|.|             
Zfish    87 ------YQHNS------------AVGYSRVEDADSEKQSSIESGEIRLNGKG------------- 120

  Fly   376 DWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTER 440
                   :::             |:.|..|:..|...|.:.|....||....|.::|..|.||:.
Zfish   121 -------KKI-------------RKPRTIYSSLQLQALNQRFQQTQYLALPERADLAAKLGLTQT 165

  Fly   441 QIKIWFQNRRMKLKKELR 458
            |:||||||:|.|.||.::
Zfish   166 QVKIWFQNKRSKYKKIMK 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeodomain 399..455 CDD:459649 22/55 (40%)
Abdominal-A 456..478 CDD:403567 0/3 (0%)
dlx4aNP_571375.1 Homeodomain 124..180 CDD:459649 22/55 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..202 0/2 (0%)

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