DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and emx2

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_571355.2 Gene:emx2 / 30537 ZFINID:ZDB-GENE-990415-54 Length:247 Species:Danio rerio


Alignment Length:272 Identity:68/272 - (25%)
Similarity:101/272 - (37%) Gaps:83/272 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 DNS-PGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGL 284
            ||. |.|.|......||.|.|                .:|:|.|:::...||..|:....|..  
Zfish    19 DNPLPSSRSEEPIRPAALSYA----------------NSSQMNPFLNGFHSSGRGVYSNPGLV-- 65

  Fly   285 EDKSCSRYTDTVMNSYQSM----SVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACT 345
                   :.:.|.:...|.    |||.          .||.||....|:.|...:......:..|
Zfish    66 -------FAEAVSHPPNSAVPVHSVPP----------PHALAAHPLSSSHSPHPLFASQQRDPST 113

  Fly   346 QPASGVMPGAGGAGGAGIADLPRYPWMT-LTDWMGSPFERVVCGDFNGP------NGCPR--RRG 401
                                  .|||:. ...::|..|:    |:...|      |...|  :|.
Zfish   114 ----------------------FYPWLIHRYRYLGHRFQ----GNETSPESFLLHNALARKPKRI 152

  Fly   402 RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQ 466
            |..::..|.|.||..|..|||:....|.::||:|.|||.|:|:||||||.|.|::     ::.|:
Zfish   153 RTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQ-----KLEEE 212

  Fly   467 ARRDREEQEKMK 478
            .   .:.|:|.|
Zfish   213 G---SDSQQKKK 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 25/51 (49%)
Abdominal-A 456..478 CDD:289192 3/21 (14%)
emx2NP_571355.2 Homeobox 153..205 CDD:278475 25/51 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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