DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment abd-A and lhx1b

DIOPT Version :9

Sequence 1:	NP_732176.1	Gene:	abd-A / 42037	FlyBaseID:	FBgn0000014	Length:	590	Species:	Drosophila melanogaster
Sequence 2:	NP_571282.1	Gene:	lhx1b / 30454	ZFINID:	ZDB-GENE-980526-116	Length:	402	Species:	Danio rerio

Alignment Length:	161	Identity:	44/161 - (27%)
Similarity:	65/161 - (40%)	Gaps:	16/161 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly   379 GSPFERVVCGDFNG-PNGCPRRRGRQTYTRFQTLE-LEKEFHFNHYLTRRRRIEIAHALCLTERQ 441
            |...::..|.:.|. .|...:|||.:|..:.:.|| |:..|......||..|.::|....|..|.
Zfish   157 GPMSDKETCNNENDEQNLGGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRV 221

  Fly   442 IKIWFQNRRMKLK--KELRAV----KEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQ 500
            |::||||||.|.:  |:|.|:    .......||.|...::|:..|.|.:...:        ...
Zfish   222 IQVWFQNRRSKERRMKQLSALGARRHMFFRSPRRMRALGDRMEPGELMANGHFS--------FYG 278

  Fly   501 QQQQQQQQQHQQQQQQPQDHHSIIAHNPGHL 531
            ..|.:...........||...|..||.||.|
Zfish   279 DYQSEYYGPGSNYDYFPQGPPSSQAHTPGDL 309

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	19/52 (37%)
abd-A	NP_732176.1	Abdominal-A	456..478	CDD:289192	5/25 (20%)
lhx1b	NP_571282.1	LIM1_Lhx1_Lhx5	4..55	CDD:188753
		LIM2_Lhx1_Lhx5	63..118	CDD:188761
		Homeobox	181..234	CDD:278475	19/52 (37%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910