Protein Alignment abd-A and hoxa10b

DIOPT Version :10

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_571230.2
• Gene: hoxa10b / 30391
• ZFINID: ZDB-GENE-990415-97
• Length: 347
• Species: Danio rerio
• Alignment Length: 376
• Identity: 102/376 - (27%)
• Similarity: 135/376 - (35%)
• Gaps: 141/376 - (37%)

  Fly   188 LTPPSAGNSQAGDSSCSPSPSASGSSSLHRSL-NDNSPGSASASASASAASSVAAAAAAAAAAAS 251
            |.|||   :.....|||.||  ||:|.|..|| :..|.||.....:                  |
Zfish     8 LLPPS---NYTTKMSCSDSP--SGNSFLVDSLIHGRSEGSGHYYQN------------------S 49

  Fly   252 SSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGL-------------------------------- 284
            ..:..|||: |.|         |||....|:||
Zfish    50 GVYLQPTSE-YSY---------GLSNCGYFSGLKRNESNSQNVVPTCGPYQGMETWLETSRSCRI 104

  Fly   285 -------------------------EDKSCSRYTDTVMNSYQSMS------------VPASASAQ 312
                                     |.:.|.:.|.|...||..::            ||.....:
Zfish   105 EQPNNQITPRSFSPTIKEENSYCLYESEKCPKETITEDISYSRLTPNSCPSSNNNGCVPVPGYFR 169

  Fly   313 FAQ-------------FYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGG-----AG 359
            .:|             ...|..|..|....:|..||..::..:...:|.: ..|.|.|     .|
Zfish   170 LSQTCTTSKGFTDNQTIPTHVVAQRSTRFDSSLSAIAAEASRDESDEPPT-CAPCAPGRNKELRG 233

  Fly   360 GAGIADLPRYPWMTLTDWMGSPFERVV---CGDFNG---PNGCPRRRGRQ---TYTRFQTLELEK 415
            ..|.|..|..|        .||.:.|.   .||...   .|....:.||:   .||:.|||||||
Zfish   234 STGTASSPEPP--------DSPEKAVTVTKAGDSKSESTANWLTAKSGRKKRCPYTKHQTLELEK 290

  Fly   416 EFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELR--AVKEIN 464
            ||.||.||||.||:||:.::.||:||:|||||||||||||..|  .::|::
Zfish   291 EFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMSRENRIRELS 341

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	38/58 (66%)
		Abdominal-A	456..478	CDD:403567	2/11 (18%)
hoxa10b	NP_571230.2	Homeodomain	274..330	CDD:459649	37/55 (67%)