Protein Alignment abd-A and hoxc5a

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_571219.2
• Gene: hoxc5a / 30379
• ZFINID: ZDB-GENE-980526-533
• Length: 233
• Species: Danio rerio
• Alignment Length: 264
• Identity: 88/264 - (33%)
• Similarity: 113/264 - (42%)
• Gaps: 91/264 - (34%)

  Fly   199 GDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYP 263
            |.|..|..|    ::||.|.. .|:...|.:||:.....|       .:|..|.||
Zfish    46 GGSFSSQIP----TNSLRREA-INTTDRARSSAAVQRTQS-------CSALGSRSF--------- 89

  Fly   264 YVSNH---PSSHGGLSGMA-GFTGLEDKSC--SRYTDTVMNSYQSMSVPASASAQFAQFYQHATA 322
             ||.|   |.|||.||..| |...:.:|..  ||..|..|.:..::....:::.:..|
Zfish    90 -VSTHGYNPLSHGLLSQKAEGNMEVMEKPSGKSRTDDIKMETTSAIKQQTNSTQRQNQ------- 146

  Fly   323 AASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVC 387
                                  :||..                   |||||         :..:.
Zfish   147 ----------------------SQPQI-------------------YPWMT---------KLHMS 161

  Fly   388 GDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 452
            .:.:|      :|.|.:|||:||||||||||||.|||||||||||:.|||.||||||||||||||
Zfish   162 HESDG------KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMK 220

  Fly   453 LKKE 456
            .||:
Zfish   221 WKKD 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	44/51 (86%)
		Abdominal-A	456..478	CDD:289192	0/1 (0%)
hoxc5a	NP_571219.2	Homeobox	169..222	CDD:278475	44/52 (85%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45659
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	4.010