Protein Alignment abd-A and Hoxb1

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: XP_220896.4
• Gene: Hoxb1 / 303491
• RGDID: 1310298
• Length: 297
• Species: Rattus norvegicus
• Alignment Length: 297
• Identity: 91/297 - (30%)
• Similarity: 115/297 - (38%)
• Gaps: 94/297 - (31%)

  Fly   190 PPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNS-------PGSASASASASAASSVAAAAAAAA 247
            |||  ::.|.||....|....|..|  .:|..||       |.|...|..:||.|..|.||...:
  Rat    29 PPS--SAPAVDSYAGESRYGGGLPS--SALQQNSGYPVQQPPSSLGVSFPSSAPSGYAPAACNPS 89

  Fly   248 AAASSSFAIPTSK---MYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSV---- 305
            ...|..:::..|:   .|    .||||:|...|     ||.|            ||.:..|
  Rat    90 YGPSQYYSMGQSEGDGGY----FHPSSYGAQLG-----GLPD------------SYGAGGVGSGP 133

  Fly   306 -----PASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIAD 365
                 |...:.|.:.|       |||....|.     |...:..::|:|
  Rat   134 YPPPQPPYGTEQTSNF-------ASAYDLLSE-----DKESSCSSEPSS---------------- 170

  Fly   366 LPRYPWMTLT----DWM---GSPFERVVCGD--FNGPNGCPRRRGRQTYTRFQTLELEKEFHFNH 421
                    ||    |||   .:|.:.....:  ...|.|.     |..:|..|..|||||||||.
  Rat   171 --------LTARTFDWMKVKRNPPKTAKVSELGLGTPGGL-----RTNFTTRQLTELEKEFHFNK 222

  Fly   422 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELR 458
            ||:|.||:|||..|.|.|.|:||||||||||.||..|
  Rat   223 YLSRARRVEIAATLELNETQVKIWFQNRRMKQKKRER 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	34/51 (67%)
		Abdominal-A	456..478	CDD:289192	1/3 (33%)
Hoxb1	XP_220896.4	Homeobox	203..255	CDD:278475	34/51 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810