DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and hoxa2b

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_571181.1 Gene:hoxa2b / 30325 ZFINID:ZDB-GENE-990415-98 Length:363 Species:Danio rerio


Alignment Length:284 Identity:82/284 - (28%)
Similarity:106/284 - (37%) Gaps:83/284 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 VMNSYQSMSVPASASAQFAQFYQHATAA----ASAVSAASAGAIGVDSL-----GNACTQPASGV 351
            |.:::||.|:.:|.       ..|:|..    ...:.:.:.|:....|.     ..:|..||:. 
Zfish    28 VGDAFQSSSIKSST-------LSHSTLIPPPFEQTIPSLNPGSHPRHSRPKQNPNGSCPLPAAS- 84

  Fly   352 MPGAGGAGGAGIADLPRYPWM-----------TLTDWMGSPFERVVCGD-FNGPNGCPR------ 398
            :|             |.||||           |.|.....|      |. :..|.|.|.      
Zfish    85 LP-------------PEYPWMKEKKASKKNQTTSTAATTDP------GPLYFSPQGSPEISDGGS 130

  Fly   399 ---RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAV 460
               ||.|..||..|.||||||||||.||.|.||:|||..|.|||||:|:||||||||.|::    
Zfish   131 GATRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ---- 191

  Fly   461 KEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQ----------------QQQQQQQQQQQQQ 509
                .|.:.:.....|..:.|........|...:|.                ||.....||.|..
Zfish   192 ----TQCKENHHGDGKPPSLEEAGGRGDGKSFFEQVANNVSGALLEREGYPFQQNTLTSQQSQNG 252

  Fly   510 HQQQQQQPQDHHSIIAHNPGHLHH 533
            |....|...  .|.:..|..||.|
Zfish   253 HNSDSQSAT--VSPLGSNDKHLKH 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 37/51 (73%)
Abdominal-A 456..478 CDD:289192 2/21 (10%)
hoxa2bNP_571181.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..132 20/109 (18%)
Antp-type hexapeptide 88..93 3/4 (75%)
Homeobox 137..189 CDD:278475 37/51 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..218 6/39 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 245..279 10/32 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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