DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and hoxb5a

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_571176.2 Gene:hoxb5a / 30317 ZFINID:ZDB-GENE-980526-70 Length:275 Species:Danio rerio


Alignment Length:285 Identity:94/285 - (32%)
Similarity:120/285 - (42%) Gaps:78/285 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 GDSSCSPSPSASGSSSLHR------------SLN-DNSPGSASASASASAASSVAAAAAAAAAAA 250
            |.||.:.:.|...|.::|.            |:| ..|.|...|....|......|........:
Zfish    25 GTSSSAMNASYRDSGTMHSGSYGYNYNGMDLSVNRSTSTGHFGAVGDNSRVFQSPAPETRFRQPS 89

  Fly   251 SSSFAIP-------TSKMYPYVSNHPSSH------GGLSGMAGFTGLEDKSCSRYTDTVMNSYQS 302
            |.|.|.|       :..:.|..|:.||..      ..|:....||.:::.|.|..|:...:...:
Zfish    90 SCSLASPEPLPCSNSESLGPKGSSPPSDQSTTTAGNNLNSNTHFTEIDEASASSETEEASHRANN 154

  Fly   303 MSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLP 367
             |.|.:...|       .|.|.|..||.|.|                               ..|
Zfish   155 -SAPRTQQKQ-------ETTATSTTSATSDG-------------------------------QAP 180

  Fly   368 R-YPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEI 431
            : :|||.         :..:..|..||:|   :|.|..|||:||||||||||||.||||||||||
Zfish   181 QIFPWMR---------KLHISHDMTGPDG---KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEI 233

  Fly   432 AHALCLTERQIKIWFQNRRMKLKKE 456
            ||||||:||||||||||||||.||:
Zfish   234 AHALCLSERQIKIWFQNRRMKWKKD 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 46/51 (90%)
Abdominal-A 456..478 CDD:289192 0/1 (0%)
hoxb5aNP_571176.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 70..181 26/149 (17%)
Antp-type hexapeptide 182..187 2/4 (50%)
Homeobox 204..256 CDD:278475 46/51 (90%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45659
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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