Protein Alignment abd-A and Hoxa9

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: XP_003752231.1
• Gene: Hoxa9 / 297099
• RGDID: 1310001
• Length: 271
• Species: Rattus norvegicus
• Alignment Length: 298
• Identity: 87/298 - (29%)
• Similarity: 113/298 - (37%)
• Gaps: 76/298 - (25%)

  Fly   190 PPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAAS--SVAAAAAAAAAAASS 252
            |.:.|..|...::.:..|             |.||.|..:.|:...||  .|.||.|.|..|
  Rat    32 PGALGQPQRQAAALAEHP-------------DFSPCSFQSKAAVFGASWNPVHAAGANAVPA--- 80

  Fly   253 SFAIPTSKMYPYVSNHPSSHGGLS---------------GMAGFTGLEDKSCSRYTDTVMNSYQS 302
              |:.....:|||  ||.:....:               |...|.||...          ..|..
  Rat    81 --AVYHHHHHPYV--HPQAPVAAAAPDGRYMRSWLEPTPGALSFAGLPSS----------RPYGI 131

  Fly   303 MSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLP 367
            ...|.||...........|.   :::..:.|:..||..    .||:.|..........:|....|
  Rat   132 KPEPLSARRGDCPTLDTHTL---SLTDYACGSPPVDRE----KQPSEGAFSENNAENESGGDKPP 189

  Fly   368 RYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 432
            ..|.....:|:.:...|        ...||       ||:.|||||||||.||.||||.||.|:|
  Rat   190 IDPNNPAANWLHARSTR--------KKRCP-------YTKHQTLELEKEFLFNMYLTRDRRYEVA 239

  Fly   433 HALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRD 470
            ..|.|||||:||||||||||:||       ||:...:|
  Rat   240 RLLNLTERQVKIWFQNRRMKMKK-------INKDRAKD 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	37/51 (73%)
		Abdominal-A	456..478	CDD:289192	3/15 (20%)
Hoxa9	XP_003752231.1	Hox9_act	1..192	CDD:398350	40/196 (20%)
		Homeobox	208..262	CDD:395001	39/60 (65%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000