Protein Alignment abd-A and Hoxb9

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_001093967.1
• Gene: Hoxb9 / 287647
• RGDID: 1306158
• Length: 250
• Species: Rattus norvegicus
• Alignment Length: 282
• Identity: 82/282 - (29%)
• Similarity: 106/282 - (37%)
• Gaps: 85/282 - (30%)

  Fly   180 GHAHQQLLLTPPSAG---NSQAGDSSCSP-SPSASGS--SSLHRSLNDNSPGSASASASASAASS 238
            |||..   |..||..   .:....:|.:| ||.||||  |..|..|   .|..|.|:.|....:.
  Rat    40 GHAEH---LDFPSCSFQPKAPVFGASWAPLSPHASGSLPSVYHPYL---QPQGAPAAESRYLRTW 98

  Fly   239 VAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSM 303
            :..|..|.||......|:   |..|           |.|..|             :.:.......
  Rat    99 LEPAPRAEAAPGQGQAAV---KAEP-----------LLGAPG-------------ELLKQGTPEY 136

  Fly   304 SVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPR 368
            |:..||..:.....|.|....:.:...|......|.     |.|::
  Rat   137 SLETSAGREAVLSNQRAGYGDNKICEGSEDKERPDQ-----TNPSA------------------- 177

  Fly   369 YPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 433
                   :|:.:...|        ...||       ||::|||||||||.||.||||.||.|:|.
  Rat   178 -------NWLHARSSR--------KKRCP-------YTKYQTLELEKEFLFNMYLTRDRRHEVAR 220

  Fly   434 ALCLTERQIKIWFQNRRMKLKK 455
            .|.|:|||:||||||||||:||
  Rat   221 LLNLSERQVKIWFQNRRMKMKK 242

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	36/51 (71%)
		Abdominal-A	456..478	CDD:289192	82/282 (29%)
Hoxb9	NP_001093967.1	Hox9_act	1..172	CDD:398350	37/164 (23%)
		Homeobox	188..242	CDD:395001	38/60 (63%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910