DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and GBX2

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001476.2 Gene:GBX2 / 2637 HGNCID:4186 Length:348 Species:Homo sapiens


Alignment Length:338 Identity:85/338 - (25%)
Similarity:116/338 - (34%) Gaps:87/338 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 HAHQQLLLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASAS---ASASAASSVA-- 240
            |.|.|:...|         ...||   |.:...:|..:|....||..|||   ..|:||...|  
Human    78 HPHHQIPSLP---------TGFCS---SLAQGMALTSTLMATLPGGFSASPQHQEAAAARKFAPQ 130

  Fly   241 ----------AAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDT 295
                      |.|..|.|.....|......:..: |...:....|.|.....|.::   |:..|.
Human   131 PLPGGGNFDKAEALQADAEDGKGFLAKEGSLLAF-SAAETVQASLVGAVRGQGKDE---SKVEDD 191

  Fly   296 VMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNAC--TQPASGVMPGAGGA 358
            .....:|.|:.:...            .:|..:.....|...:..|:|.  |.|:||   .||..
Human   192 PKGKEESFSLESDVD------------YSSDDNLTGQAAHKEEDPGHALEETPPSSG---AAGST 241

  Fly   359 GGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYL 423
            ...|                                  ..||.|..:|..|.||||||||...||
Human   242 TSTG----------------------------------KNRRRRTAFTSEQLLELEKEFHCKKYL 272

  Fly   424 TRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQ 488
            :...|.:|||||.|:|.|:||||||||.|.|:    ||..|..::.. |.....|....:.....
Human   273 SLTERSQIAHALKLSEVQVKIWFQNRRAKWKR----VKAGNANSKTG-EPSRNPKIVVPIPVHVS 332

  Fly   489 NKQVQQQQQQQQQ 501
            ...::.|.||.:|
Human   333 RFAIRSQHQQLEQ 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 31/51 (61%)
Abdominal-A 456..478 CDD:289192 4/21 (19%)
GBX2NP_001476.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..81 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..139 7/27 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..251 18/123 (15%)
Homeobox 250..303 CDD:306543 31/52 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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