DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and VAX2

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_036608.1 Gene:VAX2 / 25806 HGNCID:12661 Length:290 Species:Homo sapiens


Alignment Length:185 Identity:53/185 - (28%)
Similarity:75/185 - (40%) Gaps:37/185 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 AAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAG--GAGIADLPRYPWMTLTDWMGSPFER 384
            :.|..:.|...|....:..|.:.:.||.....||...|  |.|.||..|               |
Human    29 SGAGDLRADGGGHSPTEVAGTSASSPAGSRESGADSDGQPGPGEADHCR---------------R 78

  Fly   385 VVCGDFNG-------PNGCPRRRGRQTYTRF---QTLELEKEFHFNHYLTRRRRIEIAHALCLTE 439
            ::..|..|       |.|....|.::|.|.|   |...||.||....|:..|.|.|:|..|.|:|
Human    79 ILVRDAKGTIREIVLPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSE 143

  Fly   440 RQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQ 494
            .|:|:||||||.|.||:          ..||.|::....|.|...::...:.::|
Human   144 TQVKVWFQNRRTKQKKD----------QSRDLEKRASSSASEAFATSNILRLLEQ 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 25/54 (46%)
Abdominal-A 456..478 CDD:289192 3/21 (14%)
VAX2NP_036608.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..75 12/45 (27%)
Homeobox 105..158 CDD:306543 25/52 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 205..240
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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