DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment abd-A and Hoxc8

DIOPT Version :9

Sequence 1:	NP_732176.1	Gene:	abd-A / 42037	FlyBaseID:	FBgn0000014	Length:	590	Species:	Drosophila melanogaster
Sequence 2:	NP_001170797.2	Gene:	Hoxc8 / 24460	RGDID:	2821	Length:	242	Species:	Rattus norvegicus

Alignment Length:	257	Identity:	77/257 - (29%)
Similarity:	122/257 - (47%)	Gaps:	71/257 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly   262 YPYVSNHPSS--HGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAA 324
            :.:.|:|...  |.|.||::. :|.:...|            |:|....||    :||.:.....
  Rat    49 FQHASHHVQDFFHHGTSGISN-SGYQQNPC------------SLSCHGDAS----KFYGYEALPR 96

  Fly   325 SAVSAASAGAIGV---DSLGNACTQPASGVMPGAGGAGGAGIADLP--RYPWMTLTDWMGSPFER 384
            .::..|...|..|   |...:|.|..:.       |.|.......|  .:|||.
  Rat    97 QSLYGAQQEASVVQYPDCKSSANTNSSE-------GQGHLNQNSSPSLMFPWMR----------- 143

  Fly   385 VVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNR 449
                    |:...||.|||||:|:|||||||||.||.||||:||||::|||.|||||:|||||||
  Rat   144 --------PHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNR 200

  Fly   450 RMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQQQHQ 511
            |||.|||                     ..::.:..|:..::|:::..::::::::::::::
  Rat   201 RMKWKKE---------------------NNKDKLPGARDEEKVEEEGNEEEEKEEEEKEENK 241

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	42/51 (82%)
abd-A	NP_732176.1	Abdominal-A	456..478	CDD:289192	1/21 (5%)
Hoxc8	NP_001170797.2	Homeobox	153..206	CDD:395001	42/52 (81%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810