Protein Alignment abd-A and Hoxc4

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_001103354.1
• Gene: Hoxc4 / 24459
• RGDID: 1586210
• Length: 264
• Species: Rattus norvegicus
• Alignment Length: 337
• Identity: 95/337 - (28%)
• Similarity: 119/337 - (35%)
• Gaps: 134/337 - (39%)

  Fly   181 HAHQQLLLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAA 245
            |.||:|...||...:......||:   |..|            ||::.|...|.|.
  Rat    47 HHHQELYPPPPPRPSYPERQYSCT---SLQG------------PGNSRAHGPAQAG--------- 87

  Fly   246 AAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASAS 310
                                .:||                :||            |.:..||..|
  Rat    88 --------------------HHHP----------------EKS------------QPLCEPAPLS 104

  Fly   311 AQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPR------- 368
            .          |:||...|..           ||:|||               .|.|.
  Rat   105 G----------ASASPSPAPP-----------ACSQPA---------------PDHPSSAASKQP 133

  Fly   369 --YPWMTLTDWMGSPFERVVCGDFN-GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIE 430
              ||||          :::.....| ..||...:|.|..|||.|.||||||||:|.|||||||||
  Rat   134 IVYPWM----------KKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIE 188

  Fly   431 IAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQ 495
            |||:|||:||||||||||||||.||:.|...      .:.|.......|..|:.:|.........
  Rat   189 IAHSLCLSERQIKIWFQNRRMKWKKDHRLPN------TKVRSAPPAGAAPSTLSAATPGTSEDHS 247

  Fly   496 QQQQQQQQQQQQ 507
            |.....:||:.:
  Rat   248 QSATPPEQQRAE 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	43/51 (84%)
		Abdominal-A	456..478	CDD:289192	2/21 (10%)
Hoxc4	NP_001103354.1	Homeobox	159..213	CDD:395001	43/53 (81%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810