DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and ceh-62

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_496326.2 Gene:ceh-62 / 187642 WormBaseID:WBGene00011069 Length:278 Species:Caenorhabditis elegans


Alignment Length:109 Identity:33/109 - (30%)
Similarity:55/109 - (50%) Gaps:1/109 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 NGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 455
            :.||...||: |.|::..|...||.|:..:.|:.|.:|..:|.:|.|:|.|:|.||||||.|.|:
 Worm    90 SAPNEKSRRK-RTTFSPEQATRLEAEYIGDSYMAREKRHLLAQSLKLSENQVKTWFQNRRAKDKR 153

  Fly   456 ELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQ 499
            :.::....|..:...|....:..:.::..:..|..|.....|.|
 Worm   154 DRKSENASNHTSNSRRSSPSRKSSSDSTPTPTQATQFDMPTQIQ 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 22/51 (43%)
Abdominal-A 456..478 CDD:289192 2/21 (10%)
ceh-62NP_496326.2 Homeobox 99..152 CDD:278475 22/53 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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