DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and tab-1

DIOPT Version :10

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_495392.1 Gene:tab-1 / 185156 WormBaseID:WBGene00006380 Length:197 Species:Caenorhabditis elegans


Alignment Length:80 Identity:33/80 - (41%)
Similarity:47/80 - (58%) Gaps:1/80 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRA- 459
            |.||:.|..::..|...||:.|....||:...|||:|:||.|:|.|:|.||||||||.||.:|. 
 Worm   118 CSRRKARTVFSDQQLQGLERRFESQRYLSTPERIELANALNLSETQVKTWFQNRRMKHKKVVRKD 182

  Fly   460 VKEINEQARRDREEQ 474
            ...:::....|.|.:
 Worm   183 DNSVDDDNGNDNESE 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeodomain 399..455 CDD:459649 26/55 (47%)
Abdominal-A 456..478 CDD:403567 3/20 (15%)
tab-1NP_495392.1 Homeodomain 121..177 CDD:459649 26/55 (47%)

Return to query results.
Submit another query.