Protein Alignment abd-A and cog-1

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_001022264.1
• Gene: cog-1 / 175149
• WormBaseID: WBGene00000584
• Length: 256
• Species: Caenorhabditis elegans
• Alignment Length: 251
• Identity: 64/251 - (25%)
• Similarity: 101/251 - (40%)
• Gaps: 66/251 - (26%)

  Fly   208 SASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSH 272
            |.|||||...|.:.|.....|.||::|.....|::::::.:|.|     ||..|...::|..:..
 Worm    41 SPSGSSSEDDSASSNDDDQRSPSATSSFIFPPASSSSSSESATS-----PTQIMAQLMANGGAVD 100

  Fly   273 GGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGV 337
            .||  .|.|..|:.:..|:   ::||.....:|                         |......
 Worm   101 PGL--QAYFFLLQSQLNSQ---SMMNRVTQENV-------------------------SRALTSF 135

  Fly   338 DSLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPN--GCPRRR 400
            :.|.|         :|||          ||..          ||..|:.......||  ...:::
 Worm   136 NLLNN---------LPGA----------LPSL----------SPMGRLQHSMQLSPNSLNMQKKQ 171

  Fly   401 GRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 456
            .|.|:|..|..:||::|....||....|.::|..|.::|.|:|:||||||.|.:|:
 Worm   172 SRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKVWFQNRRTKWRKK 227

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	22/51 (43%)
		Abdominal-A	456..478	CDD:289192	0/1 (0%)
cog-1	NP_001022264.1	Homeobox	172..226	CDD:365835	22/53 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910