DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and Meox1

DIOPT Version :10

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_036012267.1 Gene:Meox1 / 17285 MGIID:103220 Length:271 Species:Mus musculus


Alignment Length:272 Identity:52/272 - (19%)
Similarity:80/272 - (29%) Gaps:98/272 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 LLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAAS 251
            |..|.|..:|.:|.|...|:|.         |.:..|...|:|:....:||.:||          
Mouse    22 LRNPHSEDSSASGLSHYPPTPF---------SFHQKSDFPATAAYPDFSASCLAA---------- 67

  Fly   252 SSFAIPT-----SKMYPYVSNHPSSHGGLSGM----------------AGFTGLEDKSCSRYTD- 294
            :..::|.     ::.:|.....|..|..:|..                ||..||.|.:.....| 
Mouse    68 TPHSLPRTERIFNEQHPAFPQTPDWHFPISEAGQRLNLGPAGSAREMGAGSPGLVDGTAGLGEDC 132

  Fly   295 ----TVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSL--GNACTQPASGVMP 353
                |:.|..:..|             .......|..|........|::.  |:||       :|
Mouse   133 MVLGTIANETEKKS-------------SRRKKERSGQSLVPEPEDEVETCEGGSAC-------VP 177

  Fly   354 GAGGAGGAGIADLPRY----------------------PWMTLTD-WM--GSPFERVVC------ 387
            ...|..|.|:....::                      |..||:. |.  |.|...:.|      
Mouse   178 TGAGPRGWGLCSFSKFRVRCSKDQNQERLKEPPLQFPPPGPTLSHLWTHPGQPAHTLRCEVAQYV 242

  Fly   388 GDFNGPNGCPRR 399
            |..|.|.|..:|
Mouse   243 GALNFPEGLAQR 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeodomain 399..455 CDD:459649 1/1 (100%)
Abdominal-A 456..478 CDD:403567
Meox1XP_036012267.1 None
Blue background indicates that the domain is not in the aligned region.

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