DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and GSX2

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_573574.2 Gene:GSX2 / 170825 HGNCID:24959 Length:304 Species:Homo sapiens


Alignment Length:328 Identity:98/328 - (29%)
Similarity:132/328 - (40%) Gaps:89/328 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 PPSAGNSQAGDSSCSPSPSASG--------SSSLHRSLNDNSPGSASASASASAA--SSVAAAAA 244
            ||....|.:| ..| ||..:..        :|.||.|......||..|.|..:.|  |.||.||.
Human    38 PPPLVMSVSG-PGC-PSRKSGAFCVCPLCVTSHLHSSRGSVGAGSGGAGAGVTGAGGSGVAGAAG 100

  Fly   245 AAAAAASSSFAIPTSKMY-PYVS-----NHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSM 303
            |.........:.|....: |.|:     :||..|                        .:.:...
Human   101 ALPLLKGQFSSAPGDAQFCPRVNHAHHHHHPPQH------------------------HHHHHQP 141

  Fly   304 SVPASASAQFAQFYQHATAAASAVSAASAGAIG-VDSLGNACTQPASGVMPGAGGAGGAGIADLP 367
            ..|.||:|          |||:|.:||:|.|:| .......||            |....:||..
Human   142 QQPGSAAA----------AAAAAAAAAAAAALGHPQHHAPVCT------------ATTYNVADPR 184

  Fly   368 RYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA 432
            |:..:|:.   ||...:|       |||   :|.|..:|..|.||||:||..|.||:|.||||||
Human   185 RFHCLTMG---GSDASQV-------PNG---KRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIA 236

  Fly   433 HALCLTERQIKIWFQNRRMKLKKELRAV--------KEINEQARRDREEQEKMKAQETMKSAQQN 489
            ..|.|:|:|:||||||||:|.|||.:..        |.:..|....|.|.|...:.   .||..:
Human   237 TYLNLSEKQVKIWFQNRRVKHKKEGKGTQRNSHAGCKCVGSQVHYARSEDEDSLSP---ASANDD 298

  Fly   490 KQV 492
            |::
Human   299 KEI 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 32/51 (63%)
Abdominal-A 456..478 CDD:289192 6/29 (21%)
GSX2NP_573574.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..151 9/68 (13%)
Homeobox 206..258 CDD:306543 32/51 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 283..304 6/22 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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