DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and tlx2

DIOPT Version :10

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_005173139.1 Gene:tlx2 / 170781 ZFINID:ZDB-GENE-020208-1 Length:309 Species:Danio rerio


Alignment Length:276 Identity:71/276 - (25%)
Similarity:102/276 - (36%) Gaps:85/276 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 TDTVMNSYQSMSVPASASAQFAQFYQ-------HATAAASAVSAASAGAIGVDS---LGNACTQP 347
            |..|.|.|.||....|.:|..|..|.       ......:..|..:.|.|.|.:   :..|..||
Zfish    50 TPNVYNGYNSMYPACSMAAGLAGSYNVNMNMNVSMNMNVNVNSGNAGGVIRVPAHRPMPPAPHQP 114

  Fly   348 ASGVMPGAGGAGGAGIADLP-----------RYPWM------------------TLTDWMGSPFE 383
            .:|..|..    .|||..:|           .:|||                  ::|..:|.|::
Zfish   115 TAGHPPSI----AAGIPTMPTVPSMGSPHSFTFPWMESSRRFAKDRLTAALSPFSVTRRIGHPYQ 175

  Fly   384 RVVCGDFNGPNGCP--RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWF 446
                      |..|  |::.|.:::|.|..||||.||...||....|..:|.||.:|:.|:|.||
Zfish   176 ----------NRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERATLAKALKMTDAQVKTWF 230

  Fly   447 QNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQQQHQ 511
            ||||.|.:             |:..||:|                 .::||..:...|.||:..|
Zfish   231 QNRRTKWR-------------RQTAEERE-----------------AERQQANRLMLQLQQEAFQ 265

  Fly   512 QQQQQPQDHHSIIAHN 527
            :...||.....:..||
Zfish   266 KTLSQPLQQDPLCLHN 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeodomain 399..455 CDD:459649 25/55 (45%)
Abdominal-A 456..478 CDD:403567 4/21 (19%)
tlx2XP_005173139.1 Homeodomain 183..239 CDD:459649 25/68 (37%)

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