DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and tlx2

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_005173139.1 Gene:tlx2 / 170781 ZFINID:ZDB-GENE-020208-1 Length:309 Species:Danio rerio


Alignment Length:276 Identity:71/276 - (25%)
Similarity:102/276 - (36%) Gaps:85/276 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 TDTVMNSYQSMSVPASASAQFAQFYQ-------HATAAASAVSAASAGAIGVDS---LGNACTQP 347
            |..|.|.|.||....|.:|..|..|.       ......:..|..:.|.|.|.:   :..|..||
Zfish    50 TPNVYNGYNSMYPACSMAAGLAGSYNVNMNMNVSMNMNVNVNSGNAGGVIRVPAHRPMPPAPHQP 114

  Fly   348 ASGVMPGAGGAGGAGIADLP-----------RYPWM------------------TLTDWMGSPFE 383
            .:|..|..    .|||..:|           .:|||                  ::|..:|.|::
Zfish   115 TAGHPPSI----AAGIPTMPTVPSMGSPHSFTFPWMESSRRFAKDRLTAALSPFSVTRRIGHPYQ 175

  Fly   384 RVVCGDFNGPNGCP--RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWF 446
                      |..|  |::.|.:::|.|..||||.||...||....|..:|.||.:|:.|:|.||
Zfish   176 ----------NRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERATLAKALKMTDAQVKTWF 230

  Fly   447 QNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQQQHQ 511
            ||||.|.:             |:..||:|                 .::||..:...|.||:..|
Zfish   231 QNRRTKWR-------------RQTAEERE-----------------AERQQANRLMLQLQQEAFQ 265

  Fly   512 QQQQQPQDHHSIIAHN 527
            :...||.....:..||
Zfish   266 KTLSQPLQQDPLCLHN 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 25/51 (49%)
Abdominal-A 456..478 CDD:289192 4/21 (19%)
tlx2XP_005173139.1 Homeobox 185..238 CDD:278475 25/52 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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