Protein Alignment abd-A and Lhx3

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: XP_038962056.1
• Gene: Lhx3 / 170671
• RGDID: 71078
• Length: 416
• Species: Rattus norvegicus
• Alignment Length: 126
• Identity: 25/126 - (19%)
• Similarity: 42/126 - (33%)
• Gaps: 39/126 - (30%)

  Fly   443 KIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQ 507
            ::||||||.|.|:       :.:.|.|.|..|.....:.:..|::.:|...|:.|....:.....
  Rat   221 QVWFQNRRAKEKR-------LKKDAGRQRWGQYFRNMKRSRGSSKSDKDSIQEGQDSDAEVSFTD 278

  Fly   508 QQHQQQQQQPQDHHSIIAHNPGHLHHSVVGQNDLKLGLGMGVGVGVGGIGPGIG---GGLG 565
            :.....                             :|...|:...:|...|.:|   ||||
  Rat   279 EPSMAD-----------------------------MGTANGLYSSLGEPAPALGRPVGGLG 310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	7/10 (70%)
		Abdominal-A	456..478	CDD:289192	4/21 (19%)
Lhx3	XP_038962056.1	LIM1_Lhx3b	18..72	CDD:188851
		LIM2_Lhx3_Lhx4	80..135	CDD:188762
		Homeobox	150..233	CDD:395001	7/11 (64%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910