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Protein Alignment abd-A and Hoxb4

DIOPT Version :9

Sequence 1:	NP_732176.1	Gene:	abd-A / 42037	FlyBaseID:	FBgn0000014	Length:	590	Species:	Drosophila melanogaster
Sequence 2:	NP_034589.3	Gene:	Hoxb4 / 15412	MGIID:	96185	Length:	250	Species:	Mus musculus

Alignment Length:	250	Identity:	80/250 - (32%)
Similarity:	101/250 - (40%)	Gaps:	75/250 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly   250 ASSSFAI---------PTSKMYPYVSNHPSSH------GGLSGMAGFTGLEDKSCSRYTDTVMNS 299
            |.|||.|         |..:.|......||.|      ||....:||.  .:.:..|.....:..
Mouse     2 AMSSFLINSNYVDPKFPPCEEYSQSDYLPSDHSPGYYAGGQRRESGFQ--PEAAFGRRAPCTVQR 64

  Fly   300 YQSMSVPA------------------------SASAQFAQFYQHATAAASA--VSAASAGAIGVD 338
            |.:...|.                        :|.|...:..|.:.|.:|:  ....:...:...
Mouse    65 YAACRDPGPPPPPPPPPPPPPPGLSPRAPVQPTAGALLPEPGQRSEAVSSSPPPPPCAQNPLHPS 129

  Fly   339 SLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPN--GCPRRRG 401
            ...:||.:|..                   ||||          .:|.....| ||  |...:|.
Mouse   130 PSHSACKEPVV-------------------YPWM----------RKVHVSTVN-PNYAGGEPKRS 164

  Fly   402 RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 456
            |..|||.|.||||||||:|.|||||||:||||||||:||||||||||||||.||:
Mouse   165 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKD 219

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.