DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and Hoxa7

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_034585.1 Gene:Hoxa7 / 15404 MGIID:96179 Length:229 Species:Mus musculus


Alignment Length:248 Identity:87/248 - (35%)
Similarity:120/248 - (48%) Gaps:48/248 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 SGMAGFTGLEDKSCSRYTDTVMNSYQSMSVP-ASASAQFAQFYQHATAAASAVSAASAGAIGVD- 338
            :|.:.|...|..|||    ...||.:|...| |.|.|.......:..:.......||...:|.| 
Mouse    16 AGASLFQNAEPTSCS----FAPNSQRSGYGPGAGAFASTVPGLYNVNSPLYQSPFASGYGLGADA 76

  Fly   339 ----------SLGNACTQPASGVMPGA--GGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFN 391
                      ::...|:..|.|....|  |...|...|....||||.                .:
Mouse    77 YNLPCASYDQNIPGLCSDLAKGACDKADEGVLHGPAEASFRIYPWMR----------------SS 125

  Fly   392 GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 456
            ||:   |:||||||||:||||||||||||.|||||||||||||||||||||||||||||||.|||
Mouse   126 GPD---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187

  Fly   457 LRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQQQ 509
                       .:|..:......::.:.|.........:::::::::::::::
Mouse   188 -----------HKDESQAPTAAPEDAVPSVSTAADKADEEEEEEEEEEEEEEE 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 49/51 (96%)
Abdominal-A 456..478 CDD:289192 2/21 (10%)
Hoxa7NP_034585.1 Antp-type hexapeptide 118..123 3/4 (75%)
Homeobox 133..185 CDD:278475 49/51 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..229 4/53 (8%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45659
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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