DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and Gbx2

DIOPT Version :10

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_034392.1 Gene:Gbx2 / 14472 MGIID:95668 Length:348 Species:Mus musculus


Alignment Length:419 Identity:99/419 - (23%)
Similarity:139/419 - (33%) Gaps:146/419 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 LSAAL--QLQQQQHHISKLAAAAV---------ASHGH----------AHQQLLLTPPSAGNSQA 198
            :|||.  .|...|..:....|.::         .|.||          .::.::|.||       
Mouse     1 MSAAFPPSLMMMQRPLGSSTAFSIDSLIGSPPQPSPGHFVYTGYPMFMPYRPVVLPPP------- 58

  Fly   199 GDSSCSPSPSASGSSSLHRSLNDNSP---------GSASASASASAASSVAAAAAAAAAAASSSF 254
                 .|.|.|...::|..:|....|         |..|:.|...|.:|...|......:||...
Mouse    59 -----PPPPPALPQAALQPALPPAHPHHQIPSLPTGFCSSLAQGMALTSTLMATLPGGFSASPQH 118

  Fly   255 --AIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFY 317
              |....|..|    .|...||                       |..::.::.|.|....|...
Mouse   119 QEAAAARKFAP----QPLPGGG-----------------------NFDKAEALQADAEDGKAFLA 156

  Fly   318 QH----ATAAASAVSAASAGAI---GVD---------------SLGNACTQPASGVMPG------ 354
            :.    |.:||.||.|:..||:   |.|               ||.:.....:...:||      
Mouse   157 KEGSLLAFSAAEAVQASLVGAVRGQGKDESKVEDDPKGKEESFSLESDVDYSSDDNLPGQTAHKE 221

  Fly   355 ------------AGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTR 407
                        :|||.|:..:                          .|.|    ||.|..:|.
Mouse   222 EDPGHALEETPQSGGAAGSTTS--------------------------TGKN----RRRRTAFTS 256

  Fly   408 FQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDRE 472
            .|.||||||||...||:...|.:|||||.|:|.|:||||||||.|.|:    ||..|..::.. |
Mouse   257 EQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKR----VKAGNANSKTG-E 316

  Fly   473 EQEKMKAQETMKSAQQNKQVQQQQQQQQQ 501
            .....|....:........::.|.||.:|
Mouse   317 PSRNPKIVVPIPVHVSRFAIRSQHQQLEQ 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeodomain 399..455 CDD:459649 33/55 (60%)
Abdominal-A 456..478 CDD:403567 4/21 (19%)
Gbx2NP_034392.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..81 6/21 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..139 9/54 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..251 14/101 (14%)
Homeodomain 248..304 CDD:459649 33/55 (60%)

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