DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and Gbx2

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_034392.1 Gene:Gbx2 / 14472 MGIID:95668 Length:348 Species:Mus musculus


Alignment Length:419 Identity:99/419 - (23%)
Similarity:139/419 - (33%) Gaps:146/419 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 LSAAL--QLQQQQHHISKLAAAAV---------ASHGH----------AHQQLLLTPPSAGNSQA 198
            :|||.  .|...|..:....|.::         .|.||          .::.::|.||       
Mouse     1 MSAAFPPSLMMMQRPLGSSTAFSIDSLIGSPPQPSPGHFVYTGYPMFMPYRPVVLPPP------- 58

  Fly   199 GDSSCSPSPSASGSSSLHRSLNDNSP---------GSASASASASAASSVAAAAAAAAAAASSSF 254
                 .|.|.|...::|..:|....|         |..|:.|...|.:|...|......:||...
Mouse    59 -----PPPPPALPQAALQPALPPAHPHHQIPSLPTGFCSSLAQGMALTSTLMATLPGGFSASPQH 118

  Fly   255 --AIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFY 317
              |....|..|    .|...||                       |..::.::.|.|....|...
Mouse   119 QEAAAARKFAP----QPLPGGG-----------------------NFDKAEALQADAEDGKAFLA 156

  Fly   318 QH----ATAAASAVSAASAGAI---GVD---------------SLGNACTQPASGVMPG------ 354
            :.    |.:||.||.|:..||:   |.|               ||.:.....:...:||      
Mouse   157 KEGSLLAFSAAEAVQASLVGAVRGQGKDESKVEDDPKGKEESFSLESDVDYSSDDNLPGQTAHKE 221

  Fly   355 ------------AGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTR 407
                        :|||.|:..:                          .|.|    ||.|..:|.
Mouse   222 EDPGHALEETPQSGGAAGSTTS--------------------------TGKN----RRRRTAFTS 256

  Fly   408 FQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDRE 472
            .|.||||||||...||:...|.:|||||.|:|.|:||||||||.|.|:    ||..|..::.. |
Mouse   257 EQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKR----VKAGNANSKTG-E 316

  Fly   473 EQEKMKAQETMKSAQQNKQVQQQQQQQQQ 501
            .....|....:........::.|.||.:|
Mouse   317 PSRNPKIVVPIPVHVSRFAIRSQHQQLEQ 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 31/51 (61%)
Abdominal-A 456..478 CDD:289192 4/21 (19%)
Gbx2NP_034392.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..81 6/21 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..139 9/54 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..251 14/101 (14%)
Homeobox 250..304 CDD:395001 31/53 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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