Protein Alignment abd-A and Emx1

DIOPT Version :10

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_034261.2
• Gene: Emx1 / 13796
• MGIID: 95387
• Length: 290
• Species: Mus musculus
• Alignment Length: 309
• Identity: 81/309 - (26%)
• Similarity: 117/309 - (37%)
• Gaps: 83/309 - (26%)

  Fly   203 CSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSN 267
            |:|..:|             :||. .|...|....|.:|||.....||...|.|         .:
Mouse     6 CTPRTAA-------------APGH-RAFPRAPLPHSASAAATMFQPAAKRGFTI---------ES 47

  Fly   268 HPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASAS--AQFAQFYQHATAAASAV--- 327
            ..:..||..|..|..|.              ....::|.||..  ...|..|.|.:||.:|.
Mouse    48 LVAKDGGTGGSPGSGGA--------------GSHPLAVAASEEPLRPTALNYPHPSAAETAFVSG 98

  Fly   328 --SAASAGAIGVDSLG-------NACTQPASGVMPGAGGAGGAGIA------------DLPRYPW 371
              :||:||| |....|       .|...||..|.| |...|.:.:.            .|..|||
Mouse    99 FPAAAAAGA-GRSLYGGPELVFPEAMNHPALTVHP-AHQLGSSSLQPPHSFFSAQHRDPLHFYPW 161

  Fly   372 MTLTDWMGSPFERVVCGD-------FNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRI 429
            :....:.|..|:   ..|       .:||.....:|.|..::..|.|.||:.|..|||:....|.
Mouse   162 VLRNRFFGHRFQ---ASDVPQDGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERK 223

  Fly   430 EIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMK 478
            ::|.:|.|:|.|:|:||||||.|.|::     ::.|:.   .|.::|.|
Mouse   224 QLAGSLSLSETQVKVWFQNRRTKYKRQ-----KLEEEG---PESEQKKK 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	24/55 (44%)
		Abdominal-A	456..478	CDD:403567	3/21 (14%)
Emx1	NP_034261.2	Homeodomain	193..249	CDD:459649	24/55 (44%)