DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and Dlx2

DIOPT Version :10

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_034184.1 Gene:Dlx2 / 13392 MGIID:94902 Length:332 Species:Mus musculus


Alignment Length:434 Identity:103/434 - (23%)
Similarity:147/434 - (33%) Gaps:159/434 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 HISKLAAAAVASHGHAHQQLLLTPPS-AGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASAS 230
            |.:::.|   :|..|.|||    ||| ||....|:|:     |:|.:||||:.  ..||....::
Mouse    13 HSTQITA---SSTYHQHQQ----PPSGAGAGPGGNSN-----SSSSNSSLHKP--QESPTLPVST 63

  Fly   231 ASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSN--HPSSHGGLSGMAGFTGLEDKSCSRYT 293
            |:.|:                            |.:|  ||:..||            ...|.|.
Mouse    64 ATDSS----------------------------YYTNQQHPAGGGG------------GGASPYA 88

  Fly   294 DTVMNSYQ-----SMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMP 353
            .  |.|||     ..:|..||.:.:...|   |||.::.:.....:..|::      :|..    
Mouse    89 H--MGSYQYHASGLNNVSYSAKSSYDLGY---TAAYTSYAPYGTSSSPVNN------EPDK---- 138

  Fly   354 GAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPR--RRGRQTYTRFQTLELEKE 416
                      .||             .|..|:|       ||.|:  |:.|..|:.||...|::.
Mouse   139 ----------EDL-------------EPEIRIV-------NGKPKKVRKPRTIYSSFQLAALQRR 173

  Fly   417 FHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQ--------------- 466
            |....||....|.|:|.:|.||:.|:||||||||.|.||..::.:...||               
Mouse   174 FQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPTEQHPGASASPPCASPPV 238

  Fly   467 ---ARRDREEQEKM----------------KAQETMKSAQQNKQVQQQQQQQQQQQQQQQQQHQQ 512
               |..|....::|                .:..:..||.........|........|.......
Mouse   239 SAPASWDFGAPQRMAGGGPGSGGGGAGSSGSSPSSAASAFLGNYPWYHQASGSASHLQATAPLLH 303

  Fly   513 QQQQPQDHHSIIAHNPGHLHHSVVGQNDLKLGLGMGVGVGVGGI 556
            ..|.||.||.   |:  |.||:           |.|..|..|.|
Mouse   304 PSQTPQAHHH---HH--HHHHA-----------GGGAPVSAGTI 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeodomain 399..455 CDD:459649 25/55 (45%)
Abdominal-A 456..478 CDD:403567 5/55 (9%)
Dlx2NP_034184.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..83 29/117 (25%)
DLL_N 54..135 CDD:463567 24/131 (18%)
Homeodomain 156..212 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..272 5/52 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..332 14/44 (32%)

Return to query results.
Submit another query.