DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and AgaP_AGAP001560

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_321553.2 Gene:AgaP_AGAP001560 / 1281608 VectorBaseID:AGAP001560 Length:338 Species:Anopheles gambiae


Alignment Length:264 Identity:73/264 - (27%)
Similarity:103/264 - (39%) Gaps:70/264 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 TGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQ 346
            |.:.....|...|.....|:....|...:...|.....:..:.|.|:||:|||       :|.|.
Mosquito   111 TDVSPPKLSPKEDYYRKLYRGEKTPERYAPYLAVRPVESLTSGSNVAAAAAGA-------SASTP 168

  Fly   347 PASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTL 411
            |   .:|.|..:.... .||.:  ...:.|.:.|                  :|.|..:|..|.|
Mosquito   169 P---TIPSASPSPTRS-TDLSQ--TYAIDDELSS------------------KRIRTAFTSTQLL 209

  Fly   412 ELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEK 476
            |||:||..|.||||.||||||..|.|:|:|:||||||||:|.||             .|.....:
Mosquito   210 ELEREFAGNMYLTRLRRIEIATRLRLSEKQVKIWFQNRRVKRKK-------------GDAPFGAE 261

  Fly   477 MKAQETMKSAQQNKQVQQQQQQQQQ---------------------QQQQQQQQH-----QQQQQ 515
            :....:.....:|...:|||||..|                     |:..:.:.|     ||||:
Mosquito   262 LSGGVSSPVGGRNSPKEQQQQQHGQHCCCRGSHCGGGGGSDSEDLPQRSAEDRTHSPVGSQQQQE 326

  Fly   516 QPQD 519
            :..|
Mosquito   327 KAWD 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 33/51 (65%)
Abdominal-A 456..478 CDD:289192 1/21 (5%)
AgaP_AGAP001560XP_321553.2 Homeobox 200..252 CDD:278475 33/51 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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