DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and AgaP_AGAP001618

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_321481.5 Gene:AgaP_AGAP001618 / 1281556 VectorBaseID:AGAP001618 Length:425 Species:Anopheles gambiae


Alignment Length:544 Identity:120/544 - (22%)
Similarity:171/544 - (31%) Gaps:161/544 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FVFDSML----PKYPQFQPFISSHHLTTTPPNSSSAAVAAALAAAAASASASVSASSSSNNNSSN 64
            |..||::    ||.|            .:||::.:.....|:......|..:|...|.       
Mosquito    29 FSIDSIVGNTTPKSP------------PSPPHTITKQGDTAIGGGVGGAGGAVPPGSG------- 74

  Fly    65 TIAGSNTSNTNNSSSSPSSSSNNNSNLNLSGGSLSPSHLSQHLGQSPHSPVSSSSPFQQHHPQVQ 129
              .|..|       .||.:|.:.:..||.. .||||.| :..:.:.|.||.|...          
Mosquito    75 --PGVRT-------PSPLASESYSVRLNRL-QSLSPPH-NYSITRLPESPQSLEG---------- 118

  Fly   130 QQHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASHGHAHQQLLLTPPSAG 194
                :|...:.|...|       |.||..:     .|.:|..|.           .|.|..|   
Mosquito   119 ----SHASVRSLEALQ-------SRLSPPV-----SHTVSPGAV-----------PLSLKRP--- 153

  Fly   195 NSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTS 259
            .|.:...|..|.|.|:|..    .|.....|.......|..|..:...            .:|..
Mosquito   154 RSSSPPVSPPPPPPATGVV----GLGGGPQGGGGPVPPAHPAGPIVVP------------GLPPG 202

  Fly   260 KMYPY-VSNHPSSH--GGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHAT 321
            .:.|: ||  ||.|  |......|....|.||...:..|          |....|...|.:..|.
Mosquito   203 LVRPFPVS--PSQHAPGAHPAQPGGPQPELKSLPPFLHT----------PEMVQAAHNQHFLAAQ 255

  Fly   322 AAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIA---DLPRYPWMTLTDWMGSPFE 383
            ..|:|::.|.||            ||.. ..|.|.......:.   ..|.|||:......|    
Mosquito   256 FQAAALAHAQAG------------QPFP-PHPAAAHLHNPNMPPRDSYPLYPWLLSRHGRG---- 303

  Fly   384 RVVCGDFNGPNGCPRRRGRQTYTRF---QTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIW 445
             |....|.|....|.|:.::..|.|   |.|:||..|..|||:....|.::|..|.|:|.|:|:|
Mosquito   304 -VFPIGFPGNYLIPFRKSKRVRTAFSPSQLLKLEHAFESNHYVVGAERKQLAQNLNLSETQVKVW 367

  Fly   446 FQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQQQH 510
            |||||.|.|             |..:||......:.|           ....|.:..::..:.:.
Mosquito   368 FQNRRTKHK-------------RMQQEEGGSGSGKST-----------DGDHQNRCDEEDDEDEF 408

  Fly   511 QQQQQQPQDHHSIIAHNPGHLHHS 534
            ......|.|..        ::||:
Mosquito   409 IDMDDCPSDEE--------NMHHN 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 24/54 (44%)
Abdominal-A 456..478 CDD:289192 3/21 (14%)
AgaP_AGAP001618XP_321481.5 Homeobox 324..376 CDD:278475 24/51 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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