Protein Alignment abd-A and cad

DIOPT Version :10

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: XP_061512454.1
• Gene: cad / 1279024
• VectorBaseID: AGAMI1_005797
• Length: 415
• Species: Anopheles gambiae
• Alignment Length: 583
• Identity: 119/583 - (20%)
• Similarity: 168/583 - (28%)
• Gaps: 258/583 - (44%)

  Fly    13 YPQFQPFISSHHLTTTPPNSSSAAVAAALAAAAASASASVSASSSSNNNSSNTIAGSNTSNTNNS 77
            :||..|..|||...:|||.:|...
Mosquito    62 HPQSSPDWSSHENFSTPPQTSFGL----------------------------------------- 85

  Fly    78 SSSPSSSSNNNSNLNLSGGSLSPSHLSQHLGQSPHSPVSSSSPFQQHHPQVQQQHLNHQQQQHLH 142
            |..||..:....:....|||......:.||||:|                            :||
Mosquito    86 SHGPSPGAGGTGSGGSGGGSGGIGSGALHLGQNP----------------------------NLH 122

  Fly   143 HQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASHGHAHQQLLLTPPSAGNSQAGDSSCSPSP 207
            |....|||..:...               ......|.|:||..|           |......|||
Mosquito   123 HHHHHHHHGNNGGG---------------NGGGGGSGGNAHDHL-----------ADGLHSIPSP 161

  Fly   208 --SASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPS 270
              :.|||..       :|||:                              ||....|.::..|
Mosquito   162 PITVSGSDM-------SSPGA------------------------------PTGSSSPQITPRP- 188

  Fly   271 SHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAI 335
                       |.::    |.|......||||...|.
Mosquito   189 -----------TPVK----SPYEWMKKQSYQSQPNPG---------------------------- 210

  Fly   336 GVDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRR 400
               .|.|.|:.|                         :|.|:  :|.|       :|.....:.:
Mosquito   211 ---GLINICSAP-------------------------SLQDF--APVE-------SGGKTRTKDK 238

  Fly   401 GRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINE 465
            .|..||..|.||||||||:..|:|.||:.|:|..|.|:|||:||||||||.|
Mosquito   239 YRVVYTDQQRLELEKEFHYTRYITIRRKAELAQNLQLSERQVKIWFQNRRAK------------- 290

  Fly   466 QARRDREEQEKMKAQET------MKSAQQNKQVQQQQQQQQ---QQQQQQQQQHQQQQQQPQDHH 521
                ||::::|.:....      :...|.......|.....   .|.........:.:.:|..|.
Mosquito   291 ----DRKQKKKAETGSVGGGMGGLGGGQSLVAAHAQGHNPHGGAAQSMSALLADTKPKLEPSLHL 351

  Fly   522 SIIAHNPGHLHHSVVGQNDLKLGLGMGVGVGVGGIGPGIGGGLGGNLGMMSALDKSNHDLLKA 584
            |       |||....      :.:||| .:|:....||....|..:||:.::   .:|.|.:|
Mosquito   352 S-------HLHQMSA------MSMGMG-SMGLHHHHPGHHAALHAHLGVPTS---QHHQLNQA 397

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	32/55 (58%)
		Abdominal-A	456..478	CDD:403567	3/21 (14%)
cad	XP_061512454.1	None