DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and AgaP_AGAP011417

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_317892.4 Gene:AgaP_AGAP011417 / 1278279 VectorBaseID:AGAP011417 Length:603 Species:Anopheles gambiae


Alignment Length:437 Identity:96/437 - (21%)
Similarity:142/437 - (32%) Gaps:136/437 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 SLNDNSPGSASASASASAASSVAAAAAAAAAAASSSFA--------IPTSKM----YPYVSNHPS 270
            |.|..||||...:.:...|::.||||.||..|.:.:.|        :..|:.    |....:..:
Mosquito    29 SPNLPSPGSVQPTTNLFGAAAAAAAAGAAGTANAHALAGLVSQHRLLELSRFGLRGYDLAQHMLT 93

  Fly   271 SHGGLSGMAG-------FTGLEDKSCSRYTDTVMNSYQ----------------SMSVPASASA- 311
            ..|.:|.:.|       ..|.:.|..:....:.:..|:                |..|..:|:| 
Mosquito    94 QQGAVSKLLGTLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEGVCTNATAP 158

  Fly   312 ---QFAQFYQHATAAASAVSAASAGAIGV---------------------DSLGNACTQPASGVM 352
               ...:..::..|..:|...|.|...|:                     ..:.| .:||.....
Mosquito   159 SVSSINRILRNRAAERAAAEFARAAGYGLYPPPPYGGFPWPTPTHLWSPGQGMPN-MSQPGGSTT 222

  Fly   353 PGAGGAGGAGIAD----------LPRYPWMTLTDWMGSPFERVVCGDFNGPNGC------PR--- 398
            ||..|:.|:|..:          :.|| :.|.:|         |...:..||.|      ||   
Mosquito   223 PGTIGSPGSGSHETLGSPDGNRLIGRY-FKTSSD---------VISQYISPNLCTHDVFEPRISS 277

  Fly   399 --------------------RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIK 443
                                ||.|.|::..|..||||||..:||.....|..:|....|:|.:::
Mosquito   278 LTTDIEGEDSNSLDGDQPKFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLASRTSLSEARVQ 342

  Fly   444 IWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQQ 508
            :||.|||.|.::..|    :|...|..........|..|..||..........|.||||||....
Mosquito   343 VWFSNRRAKWRRHQR----MNLLKRSTSPTTRAAAAAGTASSAFTPGSPPPPPQPQQQQQQPPTA 403

  Fly   509 QHQQQQQQPQ-----------------DHHSII-----AHNPGHLHH 533
            ..|.....|.                 .||.:.     .|.|.|.||
Mosquito   404 GSQPPGTSPSAQLAPSSGSPGGAAASPHHHHLPPHLAGVHLPHHAHH 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 21/51 (41%)
Abdominal-A 456..478 CDD:289192 3/21 (14%)
AgaP_AGAP011417XP_317892.4 HTH 72..168 CDD:304362 12/95 (13%)
Homeobox 301..353 CDD:278475 21/51 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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