DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and HMEN_ANOGA

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_317438.3 Gene:HMEN_ANOGA / 1277926 VectorBaseID:AGAP008023 Length:594 Species:Anopheles gambiae


Alignment Length:593 Identity:142/593 - (23%)
Similarity:193/593 - (32%) Gaps:199/593 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PQFQPFISSHHLTTTPPNSSSAAVAAALAAAAASASASVSASSSSNNNSSNTIAGSNTSNTNNSS 78
            ||..|....||.::..|.|::....|                     .:|...|.:.|:.|.::|
Mosquito     9 PQSAPSPPHHHHSSQSPTSTTTVTMA---------------------TASPVPACTTTTTTTSTS 52

  Fly    79 SSPSSSSNNNSNLNLSGGSLSPSHLSQHLGQSPHSPVSSSSPFQQHHPQVQQQHLNHQQQQHLHH 143
            .:.::||.....::|. ..:||.|:.|       .|:.|..|.....|...|...:||...|.||
Mosquito    53 GASAASSPTRDEMSLV-VPISPLHIKQ-------EPLGSDGPMPAQPPHHHQHPHHHQLPHHPHH 109

  Fly   144 Q---QQQHHHQYS---SLS------------AALQLQQQQHHISKLAAAAVASHGHAHQQLLLTP 190
            |   |||...|.|   |:|            .|...||||.|....|.....|.|..|..:||..
Mosquito   110 QHHPQQQPSPQTSPPASISFSITNILSDRFGKATAEQQQQPHPQPPAIREPISPGPIHPAVLLPY 174

  Fly   191 P---------------------------------------------------------------- 191
            |                                                                
Mosquito   175 PQHVLHPAHHPALLHPAYHTGLHHYYQPSPSHPQPIVPQPQRASLERRDSLFRPYDISKSPRLCS 239

  Fly   192 SAGNSQA---------GDSSCS-------PSPS--------ASGSSSLHRSLNDNSP-GSA-SAS 230
            |.|:|.|         .||.||       |||:        :|.||::...:..:|| ||. ..|
Mosquito   240 SNGSSSATPLPLHPYHTDSDCSTQDSTSAPSPATYGDIASPSSASSAMTTPVTTSSPTGSVYDYS 304

  Fly   231 ASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMA--GFTGLEDKSCSRYT 293
            ..|||....||.....:||||      ..|::..:.|.|...|....:|  |.||.....|...:
Mosquito   305 RKASALDHRAALLNGFSAAAS------YPKLHEEIINPPQVPGEADRIANEGGTGCGGHGCCGGS 363

  Fly   294 DTVMNSYQSMSVPASASAQFAQFYQHA------TAAASAVSAASAGAIGVDSLGNACTQPASGVM 352
            .|..|    |....|.....:|..||.      ..:.||.:.||.|..|..:......:|.....
Mosquito   364 ATPHN----MPPLGSLCKTVSQIGQHVAGTGSLNGSGSAANGASNGGSGAPATAKPTPKPIPKPA 424

  Fly   353 PGAGGAGG----AGIADLPRYPWMTLTDWMGSPFERVVCGDFNG----------------PNGCP 397
            |.:...|.    ||         |..:|...|.......|..||                |:..|
Mosquito   425 PSSETNGSSSQDAG---------MESSDDAKSETSSTKDGSENGSNLWPAWVYCTRYSDRPSSGP 480

  Fly   398 R---------------RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQ 447
            |               :|.|..::..|...|:.||:.|.|||.:||..::..|.|.|.|||||||
Mosquito   481 RYRRTKQPKEKGDSEEKRPRTAFSNAQLQRLKNEFNENRYLTEKRRQTLSAELGLNEAQIKIWFQ 545

  Fly   448 NRRMKLKK 455
            |:|.|:||
Mosquito   546 NKRAKIKK 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 24/51 (47%)
Abdominal-A 456..478 CDD:289192 142/593 (24%)
HMEN_ANOGAXP_317438.3 Homeobox 499..552 CDD:278475 24/52 (46%)
Engrail_1_C_sig 554..583 CDD:287495 142/593 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.