DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and AgaP_AGAP003671

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_313453.5 Gene:AgaP_AGAP003671 / 1274346 VectorBaseID:AGAP003671 Length:485 Species:Anopheles gambiae


Alignment Length:450 Identity:93/450 - (20%)
Similarity:137/450 - (30%) Gaps:156/450 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SASASVSASSSSNNNSSNTIAGSNTSNTNNSSSSPSSSSNNNSNLNLSGGSLSPSHLSQHLGQSP 111
            |.:||.:.|..|...|.|.|.   |.:......|...||.|..::...                 
Mosquito     2 SLTASTAKSIVSTPFSINDIL---TRSRRVERHSSGESSGNEEDMQTF----------------- 46

  Fly   112 HSPVSSSSPFQQHHPQVQQQHLNHQQQQHLHHQQQQHHHQYSSL--SAALQLQQQQHHISKLAAA 174
                        :||   :.|.||...||..|.|   |.:..:|  |.:.:...::....||:.:
Mosquito    47 ------------YHP---RHHHNHYHAQHTRHTQ---HVRRGTLEPSGSPRSTVEEGLYGKLSMS 93

  Fly   175 ----------AVASHGHAHQQLLLTPPSAGNSQAGDSSC---SPSPSASGSSSLHRSLNDNSPGS 226
                      |....|.....|   ||:.   :.|...|   |..|.......:....:....|.
Mosquito    94 YYNNNNNNNNATTPSGFPVNGL---PPAL---RRGSLDCFMVSAEPVREHGEDVAARPDTGDGGG 152

  Fly   227 ASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSR 291
            ...:.|...||.:...|..:|:..::.:.:  ||.....|..|.....|:.       .|..|  
Mosquito   153 DGGNPSERIASMLLEGARPSASVTATCYRL--SKAAHQRSESPIDMRRLAE-------NDSDC-- 206

  Fly   292 YTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAG 356
              |:..:.|                               .|::|:.. |.|.|...|..||.| 
Mosquito   207 --DSSPSPY-------------------------------TGSLGLHG-GQATTLHTSEEMPSA- 236

  Fly   357 GAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNH 421
                                                    .::|.|..::..|..|||:.|....
Mosquito   237 ----------------------------------------RKKRSRAAFSHAQVFELERRFAQQR 261

  Fly   422 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE---------LRAVKEINEQ--ARRD 470
            ||:...|.|:|..|.|||.|:||||||||.|.|::         |.|.|.:..|  .|.|
Mosquito   262 YLSGPERSELAKNLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLSATKRVPVQVLVRED 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 25/51 (49%)
Abdominal-A 456..478 CDD:289192 5/25 (20%)
AgaP_AGAP003671XP_313453.5 HOX 238..294 CDD:197696 26/55 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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