DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and AgaP_AGAP002487

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_312452.4 Gene:AgaP_AGAP002487 / 1273474 VectorBaseID:AGAP002487 Length:503 Species:Anopheles gambiae


Alignment Length:443 Identity:103/443 - (23%)
Similarity:159/443 - (35%) Gaps:118/443 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 ISKLAAAAVASHGHAHQQLLLTPPSAGNSQ-----------------AGDSSCSPS-------PS 208
            :|......||::|   ..|.|:|.||.:||                 |...|||.|       |:
Mosquito    29 VSGAGPDGVAANG---TPLGLSPTSAADSQQFNIFPAIFSRQLNFNTATAGSCSQSKLMDDLRPN 90

  Fly   209 -ASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPS-- 270
             ..|...|.:.|.|:         .|:.|.....||...|...|...|:..:::.. :..|.:  
Mosquito    91 LVGGLLGLQQGLLDD---------HAALAHGGNLAAQHNAGQDSKFMALQDNRLMG-IGAHENRL 145

  Fly   271 --------SHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQF--------AQFYQH 319
                    ..|||.|..|... .|||..::.       :..|.|...||.:        :..:.|
Mosquito   146 LGLGGQDHGRGGLGGPGGGAN-GDKSLGQHR-------KCSSTPEDFSALYGGLSGTPISDHHHH 202

  Fly   320 ATAAASAVSAAS-AGAIGVD-SLGNACTQPASGVM----PGAGGAGGAGIADLPRYPWMTLTDWM 378
            .|.|.:..:..| .|::..: :......:|.||.:    ||...:.|:||:.||::...|.|   
Mosquito   203 HTPAHTPPNRLSDNGSVTAEGAFKKLKPEPNSGPLGSSVPGGISSPGSGISGLPQHAGHTPT--- 264

  Fly   379 GSPFERVVCGDFNGPNGCP---RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTER 440
                          ...||   |||.|.|:|:.|..|||..|..:||.....|.|:|....|.|.
Mosquito   265 --------------TASCPTPARRRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEA 315

  Fly   441 QIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQ 505
            :|::||||||.|.:|:              .::.:|..|...:.|.  |..::..|.....:..|
Mosquito   316 RIQVWFQNRRAKYRKQ--------------EKQLQKALAPSVIPSC--NGMMRNIQGYSVSRGYQ 364

  Fly   506 QQQQHQQQQQQPQDHHSIIAHN-PGHLHHSVVGQNDLKLGLGMGVGVGVGGIG 557
            .........:.|||...:.|.: ||           :.....|..|..:|.:|
Mosquito   365 PYPHPNSINRYPQDLFQMGASSYPG-----------MTQPFSMTHGSNMGAVG 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 23/51 (45%)
Abdominal-A 456..478 CDD:289192 1/21 (5%)
AgaP_AGAP002487XP_312452.4 Homeobox 276..329 CDD:278475 23/52 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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