DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and AgaP_AGAP004659

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_311616.1 Gene:AgaP_AGAP004659 / 1272726 VectorBaseID:AGAP004659 Length:372 Species:Anopheles gambiae


Alignment Length:413 Identity:126/413 - (30%)
Similarity:172/413 - (41%) Gaps:109/413 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 NTIAGSNTSNTNNSSSSPSSSSNNNSNLNLSGGSLSPS-----------HLSQHLGQSPHSPVSS 117
            |:||....:|:.|::|||:::.:..|.   :.|...||           |.:.:..|| ::|::.
Mosquito    15 NSIASCYPNNSQNTNSSPNTAGSQGSQ---NDGYFPPSTYAPNIYPGTPHQAHYSPQS-YNPLAG 75

  Fly   118 SSPFQQHHPQVQQQHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAA--VASHG 180
            :.....:..........||....:.:.|.|        .....|.|||...|.|.:.:  .||.|
Mosquito    76 AGATSVNSASTGAVGGGHQSTDMVDYTQLQ--------PQKFLLSQQQQPQSALTSQSCKYASEG 132

  Fly   181 HAHQQLLLTPPSAG----NSQAGDSSCSPS--PSASGSSSLHRSLNDNSPGSASASASASAASSV 239
                      ||.|    |:...:|:.||.  .:|||.||   ..||.:.|....|...|..|.|
Mosquito   133 ----------PSTGTNVINNNNNNSTTSPQDLSTASGGSS---GANDGNNGRPEISPKLSPGSVV 184

  Fly   240 AAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMS 304
            .:.:.:..                  |.:||           |.:...|.:..|..:.|..| ::
Mosquito   185 ESVSRSLK------------------SGNPS-----------TAVSSSSTNNNTSNISNRNQ-VN 219

  Fly   305 VPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPRY 369
            :|.::..:           .|..|...:|..|..|.|            |.|.:...|......|
Mosquito   220 LPLASPEE-----------ESEASDDDSGTEGGSSQG------------GGGSSSKKGGPPPHIY 261

  Fly   370 PWMTLTDWMGSPFERVVCGDFN-GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 433
            |||          :||..|... ..|| ..:|.|.:|||:||||||||||||.||||||||||||
Mosquito   262 PWM----------KRVHIGQSTVNANG-ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAH 315

  Fly   434 ALCLTERQIKIWFQNRRMKLKKE 456
            |||||||||||||||||||.|||
Mosquito   316 ALCLTERQIKIWFQNRRMKWKKE 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 47/51 (92%)
Abdominal-A 456..478 CDD:289192 1/1 (100%)
AgaP_AGAP004659XP_311616.1 Homeobox 284..336 CDD:278475 47/51 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.