DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and AgaP_AGAP004661

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_311623.2 Gene:AgaP_AGAP004661 / 1272724 VectorBaseID:AGAP004661 Length:327 Species:Anopheles gambiae


Alignment Length:359 Identity:124/359 - (34%)
Similarity:170/359 - (47%) Gaps:61/359 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 HHHQYSSLSAALQLQQQQHHISKLAAAAVASHGHAHQQLLLTPPSAGNSQAGDSSCSPSPSASGS 212
            |.||   .:|.:......||....||||.|..|.        |.|.|          .||..  :
Mosquito    13 HPHQ---AAAGMMTTTGTHHDQTTAAAAAAYRGF--------PLSLG----------MSPYT--N 54

  Fly   213 SSLHRSLN-DNSPGSASASASASAA-SSVAAAAAAAAAAASSSFAIPTSKMYPYV--SNHPSSHG 273
            ..||::.. ..||..||..|:.... ....::........|.:....||..|..|  :|..:::|
Mosquito    55 HHLHQTRTAQESPYDASIQAACKQIYEGSYSSKDCGTKGTSGNNGTDTSNGYKDVWNANSGATNG 119

  Fly   274 GLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASA-----QFAQFYQHATAAASAVSAASAG 333
            ..:|..|              :.:.:.|:.|||...||     :...:...:..:..:.:.::|.
Mosquito   120 ATTGGTG--------------SNVPAQQNSSVPVRPSACTPDSRVGGYIDASGGSPVSRAGSAAA 170

  Fly   334 AIGVDSLGNA--CTQPASGVMPGAGGAGGAGI--ADLPRYPWMTLTDWMGSPFERVVCG----DF 390
            |.||....|.  |:...|   .|...|...|:  ::...||||.:.   |..:...:.|    |:
Mosquito   171 ATGVPGSWNTNQCSLTGS---TGGQAAPSTGLHQSNHTFYPWMAIA---GKRYSESLAGTLLPDW 229

  Fly   391 NGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 455
            .|.||. ||||||||||:||||||||||.|||||||||||:||||||||||||||||||||||||
Mosquito   230 IGANGL-RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 293

  Fly   456 ELRAVKEINEQARRDREEQEKMKAQETMKSAQQN 489
            |::|:||:|||.::.:.::....|.......:||
Mosquito   294 EIQAIKELNEQEKQAQAQKAAAAAAAAAALHEQN 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 48/51 (94%)
Abdominal-A 456..478 CDD:289192 7/21 (33%)
AgaP_AGAP004661XP_311623.2 Homeobox 240..292 CDD:278475 48/51 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D544833at33208
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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