DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and AgaP_AGAP004660

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_311618.2 Gene:AgaP_AGAP004660 / 1272720 VectorBaseID:AGAP004660 Length:324 Species:Anopheles gambiae


Alignment Length:429 Identity:118/429 - (27%)
Similarity:154/429 - (35%) Gaps:171/429 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 TSNTNNSSSSPSSSSNNNSNLNLSGGSLSPSHLSQHLGQSPHSPVSSSSPFQQHHPQVQQQHLNH 135
            |.:|||..|..|..:|:..|.::.|                            |:|......|:.
Mosquito     2 TMSTNNCESMTSYFTNSYMNSDMHG----------------------------HYPGTGVDGLDT 38

  Fly   136 QQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASHGHAHQQLLLTPP--------- 191
            .||.:.||.|                                  .||:|..:  ||         
Mosquito    39 SQQMYSHHNQ----------------------------------AHANQANM--PPYPRFPPYDR 67

  Fly   192 ---------SAGNSQAGDSSCSPS-------PSASGSSSLHRSLNDNSPGSASASASASAASSVA 240
                     .||.::|.    |||       |..|..:.|.::............||....::|.
Mosquito    68 MGYYQQTMDPAGYARAD----SPSSQVGGVIPPQSNGNPLQQTQVQPQQQQPIVYASCKLQAAVG 128

  Fly   241 AAAAAAAAAASSSFAIPTSKMYPYVSNH----PSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQ 301
            ..........:.:.:.|..:|..::...    |..|.|.|        :.:.|  |.:.|..:.|
Mosquito   129 NGPNGLGTYGTENGSPPLDQMGHHMGTAQMTIPQHHMGHS--------QGQEC--YPEQVHQTPQ 183

  Fly   302 SMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVM-------------- 352
            .|::                     .:.|..|..||       ||....:|              
Mosquito   184 HMAM---------------------YTNAGGGPPGV-------TQQQPNMMHQQPPPLHQGQQAP 220

  Fly   353 PGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEF 417
            |.:..| .:|:.. |.||||.      |.||              |:||||||||:|||||||||
Mosquito   221 PNSQNA-SSGLQS-PLYPWMR------SQFE--------------RKRGRQTYTRYQTLELEKEF 263

  Fly   418 HFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 456
            |||.|||||||||||||||||||||||||||||||.|||
Mosquito   264 HFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 49/51 (96%)
Abdominal-A 456..478 CDD:289192 1/1 (100%)
AgaP_AGAP004660XP_311618.2 Homeobox 248..300 CDD:278475 49/51 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D544833at33208
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45659
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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