DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and ABDA_ANOGA

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_003436886.1 Gene:ABDA_ANOGA / 1272718 VectorBaseID:AGAP004662 Length:370 Species:Anopheles gambiae


Alignment Length:602 Identity:245/602 - (40%)
Similarity:283/602 - (47%) Gaps:263/602 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKFVFDSMLPKYPQFQPFISSHHLTTTPPNSSSAAVAAALAAAAASASASVSASSSSNNNSSNT 65
            ||||:.|||||||.||||||||                            .:|:.|.||:||:  
Mosquito     1 MSKFIIDSMLPKYAQFQPFISS----------------------------QISSQSISNSNST-- 35

  Fly    66 IAGSNTSNTNNSSSSPSSSSNNNSNLNLSGGSLSPSHLSQHLGQSPHSPVSSSSPFQQHHPQVQQ 130
                 .|.|.||..||.::.:.:                     ||:||                
Mosquito    36 -----VSQTPNSEGSPLTTGSED---------------------SPNSP---------------- 58

  Fly   131 QHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASHGHAHQQLLLTPPSAGN 195
                                                                             
Mosquito    59 ----------------------------------------------------------------- 58

  Fly   196 SQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTSK 260
                                                                         ||||
Mosquito    59 -------------------------------------------------------------PTSK 62

  Fly   261 MYPYVSNHPSSHGGLSGMAGFTGLEDKSC-SRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAA 324
            |||:|||||::|...|.|.||:||:|||| |||||:|||||..|.||.|||  .|||||.    |
Mosquito    63 MYPFVSNHPTTHTSYSTMPGFSGLDDKSCSSRYTDSVMNSYPPMGVPGSAS--IAQFYQQ----A 121

  Fly   325 SAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTL-----------TDWM 378
            :|||||||| :||||||:||:|.:|.|    ||| .:|:.|:.|:||:..           ||||
Mosquito   122 AAVSAASAG-VGVDSLGSACSQLSSSV----GGA-QSGLPDITRHPWLVTASQSALQKFASTDWM 180

  Fly   379 GSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIK 443
            .:||:|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Mosquito   181 SNPFDRVVCGDFAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIK 245

  Fly   444 IWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQQ 508
            ||||||||||||||||||||||||||:||||:||| .|::|||||:           ..|:|.||
Mosquito   246 IWFQNRRMKLKKELRAVKEINEQARREREEQDKMK-NESLKSAQQH-----------HSQKQAQQ 298

  Fly   509 QHQQQQQQPQDHHSIIAHNPG----------------HLHH-SVVGQNDLKLGLGMGVGVGVGGI 556
            :|.....|...:........|                |||| |:|.||||||||| |:||||   
Mosquito   299 EHTVVGSQQTSNGGGTGGGTGGSGGAGSGGSSGNLGSHLHHPSIVSQNDLKLGLG-GMGVGV--- 359

  Fly   557 GPGIGGGLGGNLGMMSA 573
                    ||||.||.|
Mosquito   360 --------GGNLSMMGA 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 51/51 (100%)
Abdominal-A 456..478 CDD:289192 19/21 (90%)
ABDA_ANOGAXP_003436886.1 Homeobox 204..256 CDD:278475 51/51 (100%)
Abdominal-A 258..280 CDD:289192 19/21 (90%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 121 1.000 Domainoid score I11266
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H77525
Inparanoid 1 1.050 354 1.000 Inparanoid score I4464
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131271at6656
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 1 1.000 - - oto106283
Panther 1 1.100 - - O PTHR45659
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X15113
TreeFam 00.000 Not matched by this tool.
1010.070

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