DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and AgaP_AGAP000190

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_310944.5 Gene:AgaP_AGAP000190 / 1272074 VectorBaseID:AGAP000190 Length:493 Species:Anopheles gambiae


Alignment Length:421 Identity:84/421 - (19%)
Similarity:121/421 - (28%) Gaps:167/421 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 GSNTSNTNNSSSSPSSSSNN-NSNLNLSGGSLSP-SHLSQH-----LGQSPHSPVSS-SSPFQQH 124
            |........:...|..::|. ..:|:.:|....| :|.|.|     .|.|..|.::| .||    
Mosquito    47 GGGGGGAGGTGGGPGGANNTLADHLHGTGAHHGPHTHHSLHDGLVSGGVSVSSAITSLMSP---- 107

  Fly   125 HPQVQQQHLNHQQQQHLHH---QQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASHGHAHQQL 186
                  ..:|.....||||   ....|||.:            .||           |.|.|   
Mosquito   108 ------GGINSGGLGHLHHGAPDLSAHHHHH------------HHH-----------HQHHH--- 140

  Fly   187 LLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAAS 251
                                     ||:||.                                  
Mosquito   141 -------------------------SSALHE---------------------------------- 146

  Fly   252 SSFAIPTSKMYPYVSN---HPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQF 313
                 |..|:..:...   ..:||.|::.::..                 .:..|..||| |.:.
Mosquito   147 -----PLEKLKLWAETGDFRENSHTGMTSVSSI-----------------DHAQMGFPAS-SPRN 188

  Fly   314 AQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTL---- 374
            ..........:..::.||..           |:..|..|....|.|...       |..|:    
Mosquito   189 RSSRDRKNDVSRCINEASVK-----------TENLSSGMSHEDGTGSVA-------PGTTIQQDG 235

  Fly   375 TDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTE 439
            ||           |..|......:||.|..:|..|..|||:.|..|.|.....|.|||....|||
Mosquito   236 TD-----------GTKNDKKNKRQRRQRTHFTSQQLHELEQTFSRNRYPDMSTREEIAMWTNLTE 289

  Fly   440 RQIKIWFQNRRMKLKKELRAVKEINEQARRD 470
            .::::||:|||.|.:|..|  .::|..|..|
Mosquito   290 ARVRVWFKNRRAKWRKRER--NQMNAIAAAD 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 22/51 (43%)
Abdominal-A 456..478 CDD:289192 4/15 (27%)
AgaP_AGAP000190XP_310944.5 Homeobox 252..304 CDD:278475 22/51 (43%)
OAR 445..460 CDD:281777
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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