DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and AgaP_AGAP000484

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_310608.5 Gene:AgaP_AGAP000484 / 1271755 VectorBaseID:AGAP000484 Length:688 Species:Anopheles gambiae


Alignment Length:649 Identity:150/649 - (23%)
Similarity:215/649 - (33%) Gaps:214/649 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKFVFDSMLPKYPQF-QPFISSHHLTTTPPNSSSAAVAAALAAAAASASASVSASSSSNNNSSN 64
            |...|.|...|:.|.. ||   :....:|.|.|.|....|.|......|.|:.|.:.:|::..::
Mosquito     4 MQSPVSDCGQPESPSLSQP---NSPPASTEPASHSPKTVALLKGGGGGAGATTSTTPTSSSQEAS 65

  Fly    65 ------TIAGSNTSNTNNSSSSPSSSSNNNSNLNLSG----------------------GSLSPS 101
                  ...|..|.....::||.|:|||:..:..|.|                      |:.||:
Mosquito    66 EPGELLVRGGGGTFLDLRANSSHSNSSNSTDSEPLDGEQEAADGGCDTFADQPGADPRQGAYSPA 130

  Fly   102 HLSQHLGQSPHSPVSSSSPFQQHHPQVQQQHLNHQQQQH---LHHQQQQHHHQYSSLSAALQLQQ 163
            . :||....|.:....|..|       ..:.|.|....|   :.|....||||  |.:..|.|..
Mosquito   131 D-TQHTQPPPSTGPDRSVKF-------SIERLKHLADGHGLAVRHHHPLHHHQ--SAAEQLVLAA 185

  Fly   164 QQHH-------------ISKLAAAAVASHGH------------AHQQLLLTPPSAGNSQAGDSSC 203
            ..|.             :|.:.:.||....|            ||.    ||.:||.:....|||
Mosquito   186 GGHFPPPGSAHPPVDPGVSVIPSGAVLPPLHPAVLHPVHPAHPAHH----TPVAAGVAPLQPSSC 246

  Fly   204 SPSPSASGSSSLHRSLNDNSPG----SASASASASAASSVAAAAAAAAAAASSS----------- 253
            .|..||:.::..|.  :.:|.|    ..:|.|:|:||::.|||||||||.||.|           
Mosquito   247 FPHASATAAAPPHP--HQHSHGHQRHHQAAIAAATAAAAAAAAAAAAAAVASGSNHPAQPHQQHQ 309

  Fly   254 -------FAIPTSKMYPYVSNHPSSHG-GLSGMAGFTGLEDKSCSRY--TDTVMNSYQSMSVPAS 308
                   .|.|..:..|....||..|. .:...||.....|....|:  ..|.:||..:.:..|:
Mosquito   310 QASPHDPTASPPGQPPPPPVLHPGGHPFAIKYPAGSASPTDLEIERFKIARTAINSTAAFAAAAA 374

  Fly   309 A---------------SAQFAQFY----------------------------------------Q 318
            |               :.|....|                                        .
Mosquito   375 AKELSDIGFRIQLQDGAGQHHGGYARSDTSEELIVDGNEESSQDGISGCPVDLTRSMDNGSDTKP 439

  Fly   319 HATAAASAVSAASAGAIGVDSL------------------GNACTQPASGVM-----------PG 354
            ||.......:|:...|..|:::                  |.|.|..:.|:.           |.
Mosquito   440 HAIRDTDKEAASKRLAFSVENILDPNKFNGKQHCASGGGGGGAVTPISGGIFGPKLNGTKRGGPA 504

  Fly   355 AGGAGGAGIA---------------------------DLPRYPWMTLTDWMGSPFERVVCGDFNG 392
            ..||.|...|                           |:..:...|.:...||. .|...|...|
Mosquito   505 LNGAAGGNYATNNNNCTVNNNNNNNNNNSINHNNNANDMDDHASETDSKKDGST-NRSGDGKSQG 568

  Fly   393 PNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 456
            .:..| ||.|..:|..|.:.||.:|....||:...|:.:|.:|.|||.|:||||||||.|.||:
Mosquito   569 NSSKP-RRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 24/51 (47%)
Abdominal-A 456..478 CDD:289192 0/1 (0%)
AgaP_AGAP000484XP_310608.5 COG5576 <565..675 CDD:227863 30/68 (44%)
Homeobox 577..629 CDD:278475 24/51 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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