DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and AgaP_AGAP000488

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_310605.5 Gene:AgaP_AGAP000488 / 1271752 VectorBaseID:AGAP000488 Length:598 Species:Anopheles gambiae


Alignment Length:526 Identity:140/526 - (26%)
Similarity:200/526 - (38%) Gaps:123/526 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QFQPFIS--SHHLTTTPPNSS---------SAAVAAALAAAA----ASASASVSASSSSNNNSSN 64
            |.||..:  .||.:...|:..         ||.||||.||||    |:.:|:..|:......|.:
Mosquito    88 QQQPHHNHHQHHQSHLSPHGGGHGAVLQHHSAMVAAAAAAAALHHQAAQAAAAQAAGQHGCGSYH 152

  Fly    65 TI-------------AGSNTSNTNNSSSSPSSSSNNNSNLNLSGGSLSPSHLSQHLGQSPHSPVS 116
            .:             |.||:|..|:::||.::|.|::.:..||               .|.:|..
Mosquito   153 VVGSPAAAIPAAIPAASSNSSAINSTNSSSTNSFNHSPDSRLS---------------PPKTPPE 202

  Fly   117 SSSPFQQHHPQVQQQHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASHGH 181
            |....|.||  .||||..|...||..|....|.:|   ||...|.||||...|........:.|:
Mosquito   203 SQHQHQHHH--AQQQHHQHPAHQHPPHHTHTHINQ---LSHQTQQQQQQQQQSPTVGKTATNPGY 262

  Fly   182 A----HQQLLLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAAS-SVAA 241
            .    ...|..|.|.|   :.|....:|.||.              |.||.|:|:|:||| |...
Mosquito   263 TSFSISSILSRTEPVA---KKGLGVITPVPSL--------------PLSAEAAAAAAAASVSNGT 310

  Fly   242 AAAAAAAAASSSFAIPTSKM-----YPYVSNH------------PSSHGGLSGMAGFTGLEDKSC 289
            .:..:....|:..|...|::     :..::|.            |:||    .|...:...|.| 
Mosquito   311 VSLGSNGTPSTQDAAMLSRLGFMSQWSAIANRYAALCPPGWPWPPTSH----RMPFHSPTNDNS- 370

  Fly   290 SRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPG 354
               |:.:.|...|::.|.|..::...  .|........|....|  |...:|.    |.:||  |
Mosquito   371 ---TNAMENQSPSLTPPPSQQSKSPS--PHPAFLGGRASGCGPG--GPGGMGG----PGTGV--G 422

  Fly   355 AGGAGGAGIADLPRYPWMTLTDWMGSPF-----ERVVCGDFNGPN-------GCPRRRGRQTYTR 407
            .||.||.|..|      ...:|..|...     |.....|...||       ...:::.|..::|
Mosquito   423 PGGPGGLGPGD------DCESDDDGQEIIEEDDESDRPSDSASPNSNGSAMQAKRKKKTRTVFSR 481

  Fly   408 FQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDRE 472
            .|..:||..|....||:...|..:|.:|.|||.|:||||||||.|.|::|.|..|....|.....
Mosquito   482 AQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQLAAELEAANMANMAHA 546

  Fly   473 EQEKMK 478
            .|..::
Mosquito   547 AQRLVR 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 24/51 (47%)
Abdominal-A 456..478 CDD:289192 5/21 (24%)
AgaP_AGAP000488XP_310605.5 Homeobox 475..528 CDD:278475 24/52 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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