DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and AgaP_AGAP006923

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_308835.4 Gene:AgaP_AGAP006923 / 1270160 VectorBaseID:AGAP006923 Length:580 Species:Anopheles gambiae


Alignment Length:622 Identity:146/622 - (23%)
Similarity:199/622 - (31%) Gaps:208/622 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 SSNNNSSNTIAGSNTSNTNNSSSSPSSSSNNNSNLNLSGGSLSPSHLSQHLGQSPHSPVSSSSPF 121
            ||:.:..|.||.....:....||||.....::.      ||.||.      ...|:.|       
Mosquito    30 SSSFSIENLIAVKRRRSAGAGSSSPEIDPGDHH------GSCSPP------AAGPNVP------- 75

  Fly   122 QQHHPQVQQQHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASHGHAHQQL 186
                |......|...||     |||||               |||:   |||||.|.:..|....
Mosquito    76 ----PGYGGLLLETSQQ-----QQQQH---------------QQHY---LAAAAAAGYSAAMLSF 113

  Fly   187 LLTP----------PSAGN--SQAGDSSCSP---SPSASGSSSLHRSLNDNSPGSASASASASAA 236
            ...|          |:||.  |||.:...|.   ...:||.:..|....:..||:..|:...|..
Mosquito   114 SSFPPLYHPWSTGLPTAGRYLSQAANEKLSSFLFHHHSSGGNKSHPGGIEPCPGTYPAAEQPSGG 178

  Fly   237 SSVAAAAAAAAAAASSSFAI-PT-----SKMYPYVSNH-----------------PSSHGGLSGM 278
            ..|.....::...|.|...: ||     ||:|. |.:|                 |||.|     
Mosquito   179 GGVLPTRPSSPRGARSGDKLFPTEVDLLSKVYA-VYHHQQQQQQQQQQQQPRYLTPSSPG----- 237

  Fly   279 AGFT----GLEDKSCSRYTDTVMNSYQSMSV-----PAS------------------ASAQFAQF 316
            .|:|    .||....:..|......:|..|.     |.|                  .||..:.:
Mosquito   238 TGYTTTGAALEPNGVNPGTGNGQLHHQPQSPGETIDPGSDGGPEDEERTRPTIEDGGESADGSAY 302

  Fly   317 YQHATAAASAVSAASAGAIGVDSLGNA-----CTQPASGVMPGAGGAGGAGIADLPRYPWMTLTD 376
            ....:...|.........:| ||..:|     |||.:|    .:|.||.:|              
Mosquito   303 SDDISLTLSPSGCGKTTDLG-DSDSDACSEDDCTQNSS----SSGRAGKSG-------------- 348

  Fly   377 WMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQ 441
                          :|......||.|..:|..|.||||:|||...||:...|.:||.:|.|:|.|
Mosquito   349 --------------SGAENSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQ 399

  Fly   442 IKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQV--------QQQQQQ 498
            :||||||||.|.|   |....:|.....:|    ......|..:...||.|        :...:.
Mosquito   400 VKIWFQNRRAKWK---RVKAGLNSHGLGNR----NASGSGTGTTGTANKIVVPIPVHVNRFAIRS 457

  Fly   499 QQQQQQQQQQQHQQQQQQPQD----------------HHSII-------------------AHNP 528
            |.||.::......:.:.:..|                |.|.:                   |.:.
Mosquito   458 QHQQMEKMNLVGPKAELRKADLGLAESGGFERFGLNKHLSKVVPSAEVTGNRVDPAFQAAPAPSE 522

  Fly   529 GHLHHSVVGQNDLKLGLGMGVGVGVGGIGPGIGGGLG 565
            |....|:....   .|.|.|.|.|..|||.|...|:|
Mosquito   523 GASKSSIESSG---TGGGGGGGAGTAGIGVGFQLGMG 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 28/51 (55%)
Abdominal-A 456..478 CDD:289192 3/21 (14%)
AgaP_AGAP006923XP_308835.4 Homeobox 359..412 CDD:278475 28/52 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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