Protein Alignment abd-A and Gbx2

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_446160.1
• Gene: Gbx2 / 114500
• RGDID: 621866
• Length: 348
• Species: Rattus norvegicus
• Alignment Length: 415
• Identity: 102/415 - (24%)
• Similarity: 140/415 - (33%)
• Gaps: 138/415 - (33%)

  Fly   155 LSAAL--QLQQQQHHISKLAAAAV---------ASHGH----------AHQQLLLTPPSAGNSQA 198
            :|||.  .|...|..:....|.::         .|.||          .::.::|.||
  Rat     1 MSAAFPPSLMMMQRPLGSSTAFSIDSLIGSPPQPSPGHFVYTGYPMFMPYRPVVLPPP------- 58

  Fly   199 GDSSCSPSPSASGSSSLHRSLNDNSP---------GSASASASASAASSVAAAAAAAAAAASSSF 254
                 .|.|.|...::|..:|....|         |..|:.|...|.:|...|......:||...
  Rat    59 -----PPPPPALPQAALQPALPPAHPHHQIPSLPTGFCSSLAQGMALTSTLMATLPGGFSASPQH 118

  Fly   255 --AIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFY 317
              |....|..|    .|...||     .|    |||.:...||    ....:..|...:..
  Rat   119 QEAAAARKFAP----QPLPGGG-----NF----DKSEALQADT----EDGKAFLAKEGSLL---- 162

  Fly   318 QHATAAASAVSAASAGAI---GVD---------------SLGNACTQPASGVMPG---------- 354
              |.:||.||.|:..||:   |.|               ||.:.....:...:||
  Rat   163 --AFSAAEAVQASLVGAVRGQGKDESKVEDDPKGKEESFSLESDVDYSSDDNLPGQTAHKEEDPG 225

  Fly   355 --------AGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTL 411
                    :|||.|:..:                          .|.|    ||.|..:|..|.|
  Rat   226 HALEETPQSGGAAGSTTS--------------------------TGKN----RRRRTAFTSEQLL 260

  Fly   412 ELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEK 476
            |||||||...||:...|.:|||||.|:|.|:||||||||.|.|:    ||..|..::.. |....
  Rat   261 ELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKR----VKAGNANSKTG-EPSRN 320

  Fly   477 MKAQETMKSAQQNKQVQQQQQQQQQ 501
            .|....:........::.|.||.:|
  Rat   321 PKIVVPIPVHVSRFAIRSQHQQLEQ 345

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	31/51 (61%)
		Abdominal-A	456..478	CDD:289192	4/21 (19%)
Gbx2	NP_446160.1	Homeobox	250..304	CDD:395001	31/53 (58%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810