DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and LOC11175540

DIOPT Version :10

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_061502148.1 Gene:LOC11175540 / 11175540 VectorBaseID:AGAMI1_015109 Length:475 Species:Anopheles gambiae


Alignment Length:410 Identity:97/410 - (23%)
Similarity:139/410 - (33%) Gaps:130/410 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 TPPSAGNSQAGDSSCSPSPSASGSSSL----------------------HRSLNDNSPGSASASA 231
            :||:   ||..|..|.....|....||                      .|:|:..:| .||..:
Mosquito    43 SPPA---SQYPDGYCIDMSPAGHPKSLPSFYIERLLGFGPAERPRHSRDKRTLSTGTP-PASHCS 103

  Fly   232 SASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTV 296
            :..:..:|:.|:......||:|.|...|   |..|..|...            ||.:........
Mosquito   104 TPPSGGAVSIASERDWCGASASLAATLS---PIGSPLPEEE------------EDDAEESLEPKP 153

  Fly   297 MNSYQSMSVPASASA-QFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGG 360
            :||..|..|...|:| :..|..|......:||..|......|:...|...:..  ::.|.||..|
Mosquito   154 LNSSLSSIVYNQAAAPRHHQSMQPGRKLVNAVYIAWPEGRTVEVNLNRFQRKM--MLSGGGGGSG 216

  Fly   361 AGIADLPRY-PW----------------------MTLTDWMGSPFERVVCGD----FNGPNGCPR 398
            .| |||..| .|                      .:..|:...|:..:....    :...|  ..
Mosquito   217 DG-ADLAGYGQWHPDLGTGVPQFLPERPAHKPSLASKLDFGSDPYLHLQASTLVKRYRKQN--RE 278

  Fly   399 RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEI 463
            |:.||.|:..|...||.||..|.||...:|.|:|..|.|||.|||.||||||.|.||:       
Mosquito   279 RKPRQAYSAMQLERLEDEFQRNIYLNVNKRFELAQCLGLTETQIKTWFQNRRTKFKKQ------- 336

  Fly   464 NEQARRDREEQEKMK---------------------------------------AQETMKSA--- 486
             :.:|..||::::.:                                       ||.|::||   
Mosquito   337 -QDSRNKREQRQQAQLIAQWLFQPPQLGSIPLDGQLQPLPRLAALPVHRSSLALAQGTLQSALMA 400

  Fly   487 ------QQNKQVQQQQQQQQ 500
                  ..:..|||.|.||:
Mosquito   401 PYHLLPPTSLTVQQHQHQQR 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeodomain 399..455 CDD:459649 29/55 (53%)
Abdominal-A 456..478 CDD:403567 3/21 (14%)
LOC11175540XP_061502148.1 None

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