Protein Alignment abd-A and Hoxd11

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: XP_008760183.3
• Gene: Hoxd11 / 102553842
• RGDID: 7730597
• Length: 336
• Species: Rattus norvegicus
• Alignment Length: 269
• Identity: 75/269 - (27%)
• Similarity: 104/269 - (38%)
• Gaps: 75/269 - (27%)

  Fly   224 PGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPS---------------SHG 273
            ||.....:...|....|||||||||||:...|:... :.|.....|.               .||
  Rat    91 PGGGGGGSGGYAPYYAAAAAAAAAAAAAEEAAMQRD-LLPPAGRRPDVLFKAPEPVCGAPGPPHG 154

  Fly   274 GLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHAT----------------- 321
            ..:..:.|                  |.::.........|.|||:.|.
  Rat   155 PAAAASNF------------------YSAVGRNGILPQGFDQFYEAAPGPPFAGPQPQPAPAPPQ 201

  Fly   322 ---AAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFE 383
               ||......|.||..|    |:.|::...|..|.....||.|..:             |.|.|
  Rat   202 PEGAADKGDPKAGAGGGG----GSPCSKATPGPEPKGAAEGGGGEGE-------------GPPGE 249

  Fly   384 RVVCGDFNGPNGCPR--RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWF 446
              ...:.:|....|:  |:.|..||::|..|||:||.||.|:.:.:|::::..|.||:||:||||
  Rat   250 --AGAEKSGGTVAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWF 312

  Fly   447 QNRRMKLKK 455
            ||||||.||
  Rat   313 QNRRMKEKK 321

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	28/51 (55%)
		Abdominal-A	456..478	CDD:289192	75/269 (28%)
Hoxd11	XP_008760183.3	DUF3528	26..187	CDD:403310	26/114 (23%)
		Homeobox	267..321	CDD:395001	28/53 (53%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.000