Protein Alignment abd-A and LOC100911668

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: XP_006257771.1
• Gene: LOC100911668 / 100911668
• RGDID: 6491746
• Length: 413
• Species: Rattus norvegicus
• Alignment Length: 425
• Identity: 116/425 - (27%)
• Similarity: 150/425 - (35%)
• Gaps: 137/425 - (32%)

  Fly    73 NTNNSSSSPSSSSNNNSNLNLSGGSLSP-SHLSQHLGQSP--------------HSPVSSSSPFQ 122
            |..|.:.||......      .||.|.| :|     |.:|              ..|.....|.|
  Rat    85 NKRNEAPSPGGGGGG------GGGGLGPGAH-----GYAPAPLDLWLDAPRSCRMEPPDGPPPPQ 138

  Fly   123 QHHPQVQQQHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASHGHAHQQLL 187
               ||.|||    ||......|..|...|.:|.|.|..::::..: ....:|.....|.|...|.
  Rat   139 ---PQPQQQ----QQPPPPPPQPPQPPPQATSCSFAQNIKEESSY-CLYDSADKCPKGSAAADLA 195

  Fly   188 LTP--PSAGNSQAGDSSCSPSP---------------SASGSSSLHRSLNDNSPGSASASASASA 235
            ..|  |.......|.||..|.|               .:.|:..|........||......||.|
  Rat   196 PFPRGPPPDGCALGASSGVPVPGYFRLSQAYGTAKGFGSGGTQQLASPFPAQPPGRGFDPPSALA 260

  Fly   236 ASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSY 300
            :.|   |.||.......|...||.          ...||.|..|      |:...
  Rat   261 SGS---AEAAGKERVLDSTPPPTL----------VCAGGGSSQA------DEEAH---------- 296

  Fly   301 QSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIAD 365
                  ||:||        |...:.|.|..|..:...|||||:.::.|:.
  Rat   297 ------ASSSA--------AEELSPAPSENSKASPEKDSLGNSKSENAAN--------------- 332

  Fly   366 LPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIE 430
                 |:|                  ..:|   |:.|..||:.|||||||||.||.||||.||:|
  Rat   333 -----WLT------------------AKSG---RKKRCPYTKHQTLELEKEFLFNMYLTRERRLE 371

  Fly   431 IAHALCLTERQIKIWFQNRRMKLKKELR--AVKEI 463
            |:.::.||:||:|||||||||||||..|  .::|:
  Rat   372 ISRSVHLTDRQVKIWFQNRRMKLKKMNRENRIREL 406

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	36/51 (71%)
		Abdominal-A	456..478	CDD:289192	2/10 (20%)
LOC100911668	XP_006257771.1	Homeobox	342..395	CDD:278475	36/52 (69%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.000